==309317== Memcheck, a memory error detector ==309317== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==309317== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==309317== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==309317== Parent PID: 307378 ==309317== ==309317== ==309317== FILE DESCRIPTORS: 9 open (3 std) at exit. ==309317== Open file descriptor 12: ==309317== at 0xF80726D: pipe (pipe.c:29) ==309317== by 0x196AF07D: ??? ==309317== by 0x14CC04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==309317== by 0x114A7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309317== by 0x11440D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309317== by 0x10137D38: PetscInitialize (pinit.c:924) ==309317== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==309317== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==309317== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==309317== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==309317== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==309317== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==309317== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==309317== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==309317== ==309317== Open file descriptor 8: /dev/shm/open_mpi.0000 ==309317== at 0xF80BC0C: __open_nocancel (open64_nocancel.c:39) ==309317== by 0xF78FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==309317== by 0xF13A822: ??? ==309317== by 0xF13A96F: ??? ==309317== by 0x14D656DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309317== by 0x14D65938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309317== by 0x14D1B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309317== by 0x14CC02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==309317== by 0x114A7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309317== by 0x11440D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309317== by 0x10137D38: PetscInitialize (pinit.c:924) ==309317== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==309317== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==309317== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==309317== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==309317== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==309317== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==309317== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==309317== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==309317== ==309317== Open file descriptor 116: ==309317== ==309317== ==309317== Open file descriptor 112: ==309317== ==309317== ==309317== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==309317== ==309317== ==309317== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==309317== ==309317== ==309317== ==309317== HEAP SUMMARY: ==309317== in use at exit: 835,628 bytes in 11,677 blocks ==309317== total heap usage: 1,132,867 allocs, 1,121,190 frees, 1,617,687,049 bytes allocated ==309317== ==309317== LEAK SUMMARY: ==309317== definitely lost: 0 bytes in 0 blocks ==309317== indirectly lost: 0 bytes in 0 blocks ==309317== possibly lost: 0 bytes in 0 blocks ==309317== still reachable: 56 bytes in 3 blocks ==309317== suppressed: 835,572 bytes in 11,674 blocks ==309317== Reachable blocks (those to which a pointer was found) are not shown. ==309317== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==309317== ==309317== For lists of detected and suppressed errors, rerun with: -s ==309317== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)