==323413== Memcheck, a memory error detector ==323413== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==323413== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==323413== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==323413== Parent PID: 307378 ==323413== ==323413== ==323413== FILE DESCRIPTORS: 9 open (3 std) at exit. ==323413== Open file descriptor 12: ==323413== at 0x111F226D: pipe (pipe.c:29) ==323413== by 0x1B37307D: ??? ==323413== by 0x165854CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==323413== by 0x12E4E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==323413== by 0x12DE7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==323413== by 0x11ADED38: PetscInitialize (pinit.c:924) ==323413== by 0x109BF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==323413== by 0x109BF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==323413== by 0x23B368: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==323413== by 0x231839: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==323413== by 0x235F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==323413== by 0x235E0A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==323413== by 0x2364A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==323413== by 0x22FC55: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==323413== ==323413== Open file descriptor 8: /dev/shm/open_mpi.0000 ==323413== at 0x111F6C0C: __open_nocancel (open64_nocancel.c:39) ==323413== by 0x1117ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==323413== by 0x109FA822: ??? ==323413== by 0x109FA96F: ??? ==323413== by 0x1662A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==323413== by 0x1662A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==323413== by 0x165E0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==323413== by 0x165852DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==323413== by 0x12E4E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==323413== by 0x12DE7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==323413== by 0x11ADED38: PetscInitialize (pinit.c:924) ==323413== by 0x109BF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==323413== by 0x109BF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==323413== by 0x23B368: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==323413== by 0x231839: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==323413== by 0x235F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==323413== by 0x235E0A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==323413== by 0x2364A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==323413== by 0x22FC55: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==323413== ==323413== Open file descriptor 116: ==323413== ==323413== ==323413== Open file descriptor 112: ==323413== ==323413== ==323413== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==323413== ==323413== ==323413== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==323413== ==323413== ==323413== ==323413== HEAP SUMMARY: ==323413== in use at exit: 835,578 bytes in 11,673 blocks ==323413== total heap usage: 6,316,275 allocs, 6,304,602 frees, 2,259,240,677 bytes allocated ==323413== ==323413== LEAK SUMMARY: ==323413== definitely lost: 0 bytes in 0 blocks ==323413== indirectly lost: 0 bytes in 0 blocks ==323413== possibly lost: 0 bytes in 0 blocks ==323413== still reachable: 56 bytes in 3 blocks ==323413== suppressed: 835,522 bytes in 11,670 blocks ==323413== Reachable blocks (those to which a pointer was found) are not shown. ==323413== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==323413== ==323413== For lists of detected and suppressed errors, rerun with: -s ==323413== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)