==325782== Memcheck, a memory error detector ==325782== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==325782== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==325782== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestMonodomainProblem -malloc_debug -malloc_dump -memory_info ==325782== Parent PID: 307378 ==325782== ==325782== Warning: invalid file descriptor -1 in syscall close() ==325782== ==325782== FILE DESCRIPTORS: 9 open (3 std) at exit. ==325782== Open file descriptor 12: ==325782== at 0xC10E26D: pipe (pipe.c:29) ==325782== by 0x1432607D: ??? ==325782== by 0xFFF64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==325782== by 0xB9FC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==325782== by 0xB995D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==325782== by 0xA2D7D38: PetscInitialize (pinit.c:924) ==325782== by 0xA13C2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==325782== by 0xA13C32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==325782== by 0x14A2B6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==325782== by 0x14182D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==325782== by 0x144A20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==325782== by 0x1448C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==325782== by 0x144F57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==325782== by 0x13FC05: main (TestMonodomainProblem.cpp:19) ==325782== ==325782== Open file descriptor 8: /dev/shm/open_mpi.0000 ==325782== at 0xC112C0C: __open_nocancel (open64_nocancel.c:39) ==325782== by 0xC096BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==325782== by 0xA177822: ??? ==325782== by 0xA17796F: ??? ==325782== by 0x1009D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==325782== by 0x1009D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==325782== by 0x10053922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==325782== by 0xFFF62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==325782== by 0xB9FC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==325782== by 0xB995D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==325782== by 0xA2D7D38: PetscInitialize (pinit.c:924) ==325782== by 0xA13C2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==325782== by 0xA13C32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==325782== by 0x14A2B6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==325782== by 0x14182D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==325782== by 0x144A20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==325782== by 0x1448C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==325782== by 0x144F57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==325782== by 0x13FC05: main (TestMonodomainProblem.cpp:19) ==325782== ==325782== Open file descriptor 116: ==325782== ==325782== ==325782== Open file descriptor 112: ==325782== ==325782== ==325782== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMonodomainProblem_valgrind.txt ==325782== ==325782== ==325782== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==325782== ==325782== ==325782== ==325782== HEAP SUMMARY: ==325782== in use at exit: 836,026 bytes in 11,682 blocks ==325782== total heap usage: 6,622,138 allocs, 6,610,456 frees, 4,219,060,478 bytes allocated ==325782== ==325782== LEAK SUMMARY: ==325782== definitely lost: 0 bytes in 0 blocks ==325782== indirectly lost: 0 bytes in 0 blocks ==325782== possibly lost: 0 bytes in 0 blocks ==325782== still reachable: 24 bytes in 2 blocks ==325782== suppressed: 836,002 bytes in 11,680 blocks ==325782== Reachable blocks (those to which a pointer was found) are not shown. ==325782== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==325782== ==325782== For lists of detected and suppressed errors, rerun with: -s ==325782== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 129 from 35)