==309737== Memcheck, a memory error detector ==309737== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==309737== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==309737== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d -malloc_debug -malloc_dump -memory_info ==309737== Parent PID: 307378 ==309737== ==309737== ==309737== FILE DESCRIPTORS: 9 open (3 std) at exit. ==309737== Open file descriptor 12: ==309737== at 0xF8EE26D: pipe (pipe.c:29) ==309737== by 0x196AF07D: ??? ==309737== by 0x14CC04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==309737== by 0x1158E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309737== by 0x11527D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309737== by 0x1021ED38: PetscInitialize (pinit.c:924) ==309737== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==309737== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==309737== by 0x13385A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==309737== by 0x12E813: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==309737== by 0x130FCC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==309737== by 0x130EC7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==309737== by 0x1314DB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==309737== by 0x12D015: main (TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d.cpp:18) ==309737== ==309737== Open file descriptor 8: /dev/shm/open_mpi.0000 ==309737== at 0xF8F2C0C: __open_nocancel (open64_nocancel.c:39) ==309737== by 0xF876BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==309737== by 0xF13A822: ??? ==309737== by 0xF13A96F: ??? ==309737== by 0x14D656DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309737== by 0x14D65938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309737== by 0x14D1B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309737== by 0x14CC02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==309737== by 0x1158E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309737== by 0x11527D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309737== by 0x1021ED38: PetscInitialize (pinit.c:924) ==309737== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==309737== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==309737== by 0x13385A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==309737== by 0x12E813: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==309737== by 0x130FCC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==309737== by 0x130EC7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==309737== by 0x1314DB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==309737== by 0x12D015: main (TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d.cpp:18) ==309737== ==309737== Open file descriptor 116: ==309737== ==309737== ==309737== Open file descriptor 112: ==309737== ==309737== ==309737== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d_valgrind.txt ==309737== ==309737== ==309737== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==309737== ==309737== ==309737== ==309737== HEAP SUMMARY: ==309737== in use at exit: 835,562 bytes in 11,673 blocks ==309737== total heap usage: 6,680,421 allocs, 6,668,748 frees, 9,197,136,819 bytes allocated ==309737== ==309737== LEAK SUMMARY: ==309737== definitely lost: 0 bytes in 0 blocks ==309737== indirectly lost: 0 bytes in 0 blocks ==309737== possibly lost: 0 bytes in 0 blocks ==309737== still reachable: 56 bytes in 3 blocks ==309737== suppressed: 835,506 bytes in 11,670 blocks ==309737== Reachable blocks (those to which a pointer was found) are not shown. ==309737== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==309737== ==309737== For lists of detected and suppressed errors, rerun with: -s ==309737== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)