==309858== Memcheck, a memory error detector ==309858== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==309858== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==309858== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==309858== Parent PID: 307378 ==309858== ==309858== ==309858== FILE DESCRIPTORS: 9 open (3 std) at exit. ==309858== Open file descriptor 12: ==309858== at 0x10DE726D: pipe (pipe.c:29) ==309858== by 0x196AF07D: ??? ==309858== by 0x14C204CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==309858== by 0x10608418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309858== by 0x105A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309858== by 0xF298D38: PetscInitialize (pinit.c:924) ==309858== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==309858== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==309858== by 0x1FFF0F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==309858== by 0x1F9AB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==309858== by 0x1FD424: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==309858== by 0x1FD2C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==309858== by 0x1FD95B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==309858== by 0x1F7ED5: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==309858== ==309858== Open file descriptor 8: /dev/shm/open_mpi.0000 ==309858== at 0x10DEBC0C: __open_nocancel (open64_nocancel.c:39) ==309858== by 0x10D6FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==309858== by 0xF13A822: ??? ==309858== by 0xF13A96F: ??? ==309858== by 0x14CC56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309858== by 0x14CC5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309858== by 0x14C7B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309858== by 0x14C202DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==309858== by 0x10608418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309858== by 0x105A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309858== by 0xF298D38: PetscInitialize (pinit.c:924) ==309858== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==309858== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==309858== by 0x1FFF0F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==309858== by 0x1F9AB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==309858== by 0x1FD424: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==309858== by 0x1FD2C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==309858== by 0x1FD95B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==309858== by 0x1F7ED5: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==309858== ==309858== Open file descriptor 116: ==309858== ==309858== ==309858== Open file descriptor 112: ==309858== ==309858== ==309858== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==309858== ==309858== ==309858== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==309858== ==309858== ==309858== ==309858== HEAP SUMMARY: ==309858== in use at exit: 835,562 bytes in 11,673 blocks ==309858== total heap usage: 9,706,124 allocs, 9,694,451 frees, 2,791,235,572 bytes allocated ==309858== ==309858== LEAK SUMMARY: ==309858== definitely lost: 0 bytes in 0 blocks ==309858== indirectly lost: 0 bytes in 0 blocks ==309858== possibly lost: 0 bytes in 0 blocks ==309858== still reachable: 56 bytes in 3 blocks ==309858== suppressed: 835,506 bytes in 11,670 blocks ==309858== Reachable blocks (those to which a pointer was found) are not shown. ==309858== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==309858== ==309858== For lists of detected and suppressed errors, rerun with: -s ==309858== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)