==323571== Memcheck, a memory error detector ==323571== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==323571== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==323571== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningCryptSimulationsWithMutationsTutorial -malloc_debug -malloc_dump -memory_info ==323571== Parent PID: 307378 ==323571== ==323571== ==323571== FILE DESCRIPTORS: 9 open (3 std) at exit. ==323571== Open file descriptor 12: ==323571== at 0x1257E26D: pipe (pipe.c:29) ==323571== by 0x1B37007D: ??? ==323571== by 0x164F34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==323571== by 0x11E86418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==323571== by 0x11E1FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==323571== by 0x10AE8D38: PetscInitialize (pinit.c:924) ==323571== by 0x109BF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==323571== by 0x109BF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==323571== by 0x123E95: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==323571== by 0x11F713: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==323571== by 0x12197C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==323571== by 0x121878: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==323571== by 0x121E8B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==323571== by 0x11DF15: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==323571== ==323571== Open file descriptor 8: /dev/shm/open_mpi.0000 ==323571== at 0x12582C0C: __open_nocancel (open64_nocancel.c:39) ==323571== by 0x12506BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==323571== by 0x11D78822: ??? ==323571== by 0x11D7896F: ??? ==323571== by 0x165986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==323571== by 0x16598938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==323571== by 0x1654E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==323571== by 0x164F32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==323571== by 0x11E86418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==323571== by 0x11E1FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==323571== by 0x10AE8D38: PetscInitialize (pinit.c:924) ==323571== by 0x109BF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==323571== by 0x109BF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==323571== by 0x123E95: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==323571== by 0x11F713: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==323571== by 0x12197C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==323571== by 0x121878: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==323571== by 0x121E8B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==323571== by 0x11DF15: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==323571== ==323571== Open file descriptor 116: ==323571== ==323571== ==323571== Open file descriptor 112: ==323571== ==323571== ==323571== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningCryptSimulationsWithMutationsTutorial_valgrind.txt ==323571== ==323571== ==323571== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==323571== ==323571== ==323571== ==323571== HEAP SUMMARY: ==323571== in use at exit: 835,578 bytes in 11,673 blocks ==323571== total heap usage: 16,194,299 allocs, 16,182,626 frees, 3,031,652,258 bytes allocated ==323571== ==323571== LEAK SUMMARY: ==323571== definitely lost: 0 bytes in 0 blocks ==323571== indirectly lost: 0 bytes in 0 blocks ==323571== possibly lost: 0 bytes in 0 blocks ==323571== still reachable: 56 bytes in 3 blocks ==323571== suppressed: 835,522 bytes in 11,670 blocks ==323571== Reachable blocks (those to which a pointer was found) are not shown. ==323571== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==323571== ==323571== For lists of detected and suppressed errors, rerun with: -s ==323571== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)