==323604== Memcheck, a memory error detector ==323604== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==323604== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==323604== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningMeshBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==323604== Parent PID: 307378 ==323604== ==323604== ==323604== FILE DESCRIPTORS: 9 open (3 std) at exit. ==323604== Open file descriptor 12: ==323604== at 0x1257E26D: pipe (pipe.c:29) ==323604== by 0x1B37007D: ??? ==323604== by 0x164F34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==323604== by 0x11E86418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==323604== by 0x11E1FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==323604== by 0x10AE8D38: PetscInitialize (pinit.c:924) ==323604== by 0x109BF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==323604== by 0x109BF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==323604== by 0x120E0B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==323604== by 0x11C633: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==323604== by 0x11E8CE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==323604== by 0x11E7CA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==323604== by 0x11EDDD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==323604== by 0x11AE35: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==323604== ==323604== Open file descriptor 8: /dev/shm/open_mpi.0000 ==323604== at 0x12582C0C: __open_nocancel (open64_nocancel.c:39) ==323604== by 0x12506BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==323604== by 0x11D78822: ??? ==323604== by 0x11D7896F: ??? ==323604== by 0x165986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==323604== by 0x16598938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==323604== by 0x1654E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==323604== by 0x164F32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==323604== by 0x11E86418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==323604== by 0x11E1FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==323604== by 0x10AE8D38: PetscInitialize (pinit.c:924) ==323604== by 0x109BF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==323604== by 0x109BF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==323604== by 0x120E0B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==323604== by 0x11C633: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==323604== by 0x11E8CE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==323604== by 0x11E7CA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==323604== by 0x11EDDD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==323604== by 0x11AE35: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==323604== ==323604== Open file descriptor 116: ==323604== ==323604== ==323604== Open file descriptor 112: ==323604== ==323604== ==323604== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedCryptSimulationsTutorial_valgrind.txt ==323604== ==323604== ==323604== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==323604== ==323604== ==323604== ==323604== HEAP SUMMARY: ==323604== in use at exit: 835,578 bytes in 11,673 blocks ==323604== total heap usage: 1,761,949 allocs, 1,750,276 frees, 1,716,748,717 bytes allocated ==323604== ==323604== LEAK SUMMARY: ==323604== definitely lost: 0 bytes in 0 blocks ==323604== indirectly lost: 0 bytes in 0 blocks ==323604== possibly lost: 0 bytes in 0 blocks ==323604== still reachable: 56 bytes in 3 blocks ==323604== suppressed: 835,522 bytes in 11,670 blocks ==323604== Reachable blocks (those to which a pointer was found) are not shown. ==323604== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==323604== ==323604== For lists of detected and suppressed errors, rerun with: -s ==323604== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)