==323139== Memcheck, a memory error detector ==323139== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==323139== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==323139== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningVertexBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==323139== Parent PID: 307378 ==323139== ==323139== ==323139== FILE DESCRIPTORS: 9 open (3 std) at exit. ==323139== Open file descriptor 12: ==323139== at 0x10DA526D: pipe (pipe.c:29) ==323139== by 0x196AF07D: ??? ==323139== by 0x14C204CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==323139== by 0x105C6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==323139== by 0x1055FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==323139== by 0xF228D38: PetscInitialize (pinit.c:924) ==323139== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==323139== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==323139== by 0x1298A9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==323139== by 0x124A2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==323139== by 0x1270AA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==323139== by 0x126F4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==323139== by 0x1275E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==323139== by 0x122E55: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==323139== ==323139== Open file descriptor 8: /dev/shm/open_mpi.0000 ==323139== at 0x10DA9C0C: __open_nocancel (open64_nocancel.c:39) ==323139== by 0x10D2DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==323139== by 0x104B8822: ??? ==323139== by 0x104B896F: ??? ==323139== by 0x14CC56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==323139== by 0x14CC5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==323139== by 0x14C7B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==323139== by 0x14C202DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==323139== by 0x105C6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==323139== by 0x1055FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==323139== by 0xF228D38: PetscInitialize (pinit.c:924) ==323139== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==323139== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==323139== by 0x1298A9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==323139== by 0x124A2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==323139== by 0x1270AA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==323139== by 0x126F4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==323139== by 0x1275E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==323139== by 0x122E55: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==323139== ==323139== Open file descriptor 116: ==323139== ==323139== ==323139== Open file descriptor 112: ==323139== ==323139== ==323139== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedSimulationsTutorial_valgrind.txt ==323139== ==323139== ==323139== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==323139== ==323139== ==323139== ==323139== HEAP SUMMARY: ==323139== in use at exit: 835,562 bytes in 11,673 blocks ==323139== total heap usage: 1,407,176 allocs, 1,395,503 frees, 1,600,204,973 bytes allocated ==323139== ==323139== LEAK SUMMARY: ==323139== definitely lost: 0 bytes in 0 blocks ==323139== indirectly lost: 0 bytes in 0 blocks ==323139== possibly lost: 0 bytes in 0 blocks ==323139== still reachable: 56 bytes in 3 blocks ==323139== suppressed: 835,506 bytes in 11,670 blocks ==323139== Reachable blocks (those to which a pointer was found) are not shown. ==323139== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==323139== ==323139== For lists of detected and suppressed errors, rerun with: -s ==323139== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)