==607729== Memcheck, a memory error detector ==607729== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==607729== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==607729== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==607729== Parent PID: 606210 ==607729== ==607729== ==607729== FILE DESCRIPTORS: 10 open (3 std) at exit. ==607729== Open file descriptor 12: ==607729== at 0xE86426D: pipe (pipe.c:29) ==607729== by 0x18AE307D: ??? ==607729== by 0x140804CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==607729== by 0x104C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==607729== by 0x1045AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==607729== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==607729== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==607729== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==607729== by 0x1654C8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==607729== by 0x15DB89: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==607729== by 0x160CF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==607729== by 0x160B94: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==607729== by 0x16122B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==607729== by 0x15BFA5: main (TestCaBasedCellPopulation.cpp:19) ==607729== ==607729== Open file descriptor 8: /dev/shm/open_mpi.0000 ==607729== at 0xE868C0C: __open_nocancel (open64_nocancel.c:39) ==607729== by 0xE7ECBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==607729== by 0xE49F822: ??? ==607729== by 0xE49F96F: ??? ==607729== by 0x141256DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==607729== by 0x14125938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==607729== by 0x140DB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==607729== by 0x140802DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==607729== by 0x104C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==607729== by 0x1045AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==607729== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==607729== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==607729== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==607729== by 0x1654C8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==607729== by 0x15DB89: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==607729== by 0x160CF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==607729== by 0x160B94: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==607729== by 0x16122B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==607729== by 0x15BFA5: main (TestCaBasedCellPopulation.cpp:19) ==607729== ==607729== Open file descriptor 118: ==607729== ==607729== ==607729== Open file descriptor 114: ==607729== ==607729== ==607729== Open file descriptor 113: /etc/ssl/certs/ca-certificates.crt ==607729== ==607729== ==607729== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaBasedCellPopulation_valgrind.txt ==607729== ==607729== ==607729== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==607729== ==607729== ==607729== ==607729== HEAP SUMMARY: ==607729== in use at exit: 858,019 bytes in 12,113 blocks ==607729== total heap usage: 83,508 allocs, 71,395 frees, 1,551,762,512 bytes allocated ==607729== ==607729== LEAK SUMMARY: ==607729== definitely lost: 0 bytes in 0 blocks ==607729== indirectly lost: 0 bytes in 0 blocks ==607729== possibly lost: 0 bytes in 0 blocks ==607729== still reachable: 56 bytes in 3 blocks ==607729== suppressed: 857,963 bytes in 12,110 blocks ==607729== Reachable blocks (those to which a pointer was found) are not shown. ==607729== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==607729== ==607729== For lists of detected and suppressed errors, rerun with: -s ==607729== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)