==617341== Memcheck, a memory error detector ==617341== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==617341== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==617341== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCheckpointing -malloc_debug -malloc_dump -memory_info ==617341== Parent PID: 606210 ==617341== ==617341== ==617341== FILE DESCRIPTORS: 10 open (3 std) at exit. ==617341== Open file descriptor 12: ==617341== at 0xA0ED26D: pipe (pipe.c:29) ==617341== by 0x1405B07D: ??? ==617341== by 0xF7F94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==617341== by 0xB7E5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==617341== by 0xB77ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==617341== by 0xA475D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==617341== by 0x9D1A153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==617341== by 0x9D1A1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==617341== by 0x123956: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==617341== by 0x11E4B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==617341== by 0x120CD0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==617341== by 0x120BCB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==617341== by 0x1211DF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==617341== by 0x11CCB5: main (TestCheckpointing.cpp:18) ==617341== ==617341== Open file descriptor 8: /dev/shm/open_mpi.0000 ==617341== at 0xA0F1C0C: __open_nocancel (open64_nocancel.c:39) ==617341== by 0xA075BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==617341== by 0x9D4E822: ??? ==617341== by 0x9D4E96F: ??? ==617341== by 0xF89E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==617341== by 0xF89E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==617341== by 0xF854922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==617341== by 0xF7F92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==617341== by 0xB7E5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==617341== by 0xB77ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==617341== by 0xA475D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==617341== by 0x9D1A153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==617341== by 0x9D1A1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==617341== by 0x123956: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==617341== by 0x11E4B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==617341== by 0x120CD0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==617341== by 0x120BCB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==617341== by 0x1211DF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==617341== by 0x11CCB5: main (TestCheckpointing.cpp:18) ==617341== ==617341== Open file descriptor 118: ==617341== ==617341== ==617341== Open file descriptor 114: ==617341== ==617341== ==617341== Open file descriptor 113: /etc/ssl/certs/ca-certificates.crt ==617341== ==617341== ==617341== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCheckpointing_valgrind.txt ==617341== ==617341== ==617341== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==617341== ==617341== ==617341== ==617341== HEAP SUMMARY: ==617341== in use at exit: 858,423 bytes in 12,118 blocks ==617341== total heap usage: 843,715 allocs, 831,597 frees, 1,648,220,843 bytes allocated ==617341== ==617341== LEAK SUMMARY: ==617341== definitely lost: 0 bytes in 0 blocks ==617341== indirectly lost: 0 bytes in 0 blocks ==617341== possibly lost: 0 bytes in 0 blocks ==617341== still reachable: 24 bytes in 2 blocks ==617341== suppressed: 858,399 bytes in 12,116 blocks ==617341== Reachable blocks (those to which a pointer was found) are not shown. ==617341== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==617341== ==617341== For lists of detected and suppressed errors, rerun with: -s ==617341== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 46 from 20)