==606213== Memcheck, a memory error detector ==606213== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==606213== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==606213== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==606213== Parent PID: 606210 ==606213== ==606213== ==606213== FILE DESCRIPTORS: 10 open (3 std) at exit. ==606213== Open file descriptor 12: ==606213== at 0x4CB126D: pipe (pipe.c:29) ==606213== by 0xAEA107D: ??? ==606213== by 0x89BA4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==606213== by 0x626D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==606213== by 0x6206D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==606213== by 0x4EFDD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==606213== by 0x48FA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==606213== by 0x48FA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==606213== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==606213== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==606213== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==606213== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==606213== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==606213== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==606213== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==606213== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==606213== by 0x110C15: main (TestCitations.cpp:18) ==606213== ==606213== Open file descriptor 8: /dev/shm/open_mpi.0000 ==606213== at 0x4CB5C0C: __open_nocancel (open64_nocancel.c:39) ==606213== by 0x4C39BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==606213== by 0x492E822: ??? ==606213== by 0x492E96F: ??? ==606213== by 0x8A5F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==606213== by 0x8A5F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==606213== by 0x8A15922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==606213== by 0x89BA2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==606213== by 0x626D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==606213== by 0x6206D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==606213== by 0x4EFDD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==606213== by 0x48FA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==606213== by 0x48FA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==606213== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==606213== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==606213== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==606213== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==606213== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==606213== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==606213== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==606213== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==606213== by 0x110C15: main (TestCitations.cpp:18) ==606213== ==606213== Open file descriptor 118: ==606213== ==606213== ==606213== Open file descriptor 114: ==606213== ==606213== ==606213== Open file descriptor 113: /etc/ssl/certs/ca-certificates.crt ==606213== ==606213== ==606213== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==606213== ==606213== ==606213== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==606213== ==606213== ==606213== ==606213== HEAP SUMMARY: ==606213== in use at exit: 857,491 bytes in 12,112 blocks ==606213== total heap usage: 54,339 allocs, 42,227 frees, 1,542,863,511 bytes allocated ==606213== ==606213== LEAK SUMMARY: ==606213== definitely lost: 0 bytes in 0 blocks ==606213== indirectly lost: 0 bytes in 0 blocks ==606213== possibly lost: 0 bytes in 0 blocks ==606213== still reachable: 24 bytes in 2 blocks ==606213== suppressed: 857,467 bytes in 12,110 blocks ==606213== Reachable blocks (those to which a pointer was found) are not shown. ==606213== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==606213== ==606213== For lists of detected and suppressed errors, rerun with: -s ==606213== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 20 from 20)