==607967== Memcheck, a memory error detector ==607967== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==607967== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==607967== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestDeltaNotchModifier -malloc_debug -malloc_dump -memory_info ==607967== Parent PID: 606210 ==607967== ==607967== ==607967== FILE DESCRIPTORS: 10 open (3 std) at exit. ==607967== Open file descriptor 12: ==607967== at 0xE86426D: pipe (pipe.c:29) ==607967== by 0x18AE307D: ??? ==607967== by 0x140804CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==607967== by 0x104C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==607967== by 0x1045AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==607967== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==607967== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==607967== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==607967== by 0x208464: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==607967== by 0x1FFF59: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==607967== by 0x2038EE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==607967== by 0x20378E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==607967== by 0x203E25: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==607967== by 0x1FE375: main (TestDeltaNotchModifier.cpp:19) ==607967== ==607967== Open file descriptor 8: /dev/shm/open_mpi.0000 ==607967== at 0xE868C0C: __open_nocancel (open64_nocancel.c:39) ==607967== by 0xE7ECBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==607967== by 0xE49F822: ??? ==607967== by 0xE49F96F: ??? ==607967== by 0x141256DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==607967== by 0x14125938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==607967== by 0x140DB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==607967== by 0x140802DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==607967== by 0x104C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==607967== by 0x1045AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==607967== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==607967== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==607967== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==607967== by 0x208464: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==607967== by 0x1FFF59: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==607967== by 0x2038EE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==607967== by 0x20378E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==607967== by 0x203E25: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==607967== by 0x1FE375: main (TestDeltaNotchModifier.cpp:19) ==607967== ==607967== Open file descriptor 118: ==607967== ==607967== ==607967== Open file descriptor 114: ==607967== ==607967== ==607967== Open file descriptor 113: /etc/ssl/certs/ca-certificates.crt ==607967== ==607967== ==607967== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestDeltaNotchModifier_valgrind.txt ==607967== ==607967== ==607967== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==607967== ==607967== ==607967== ==607967== HEAP SUMMARY: ==607967== in use at exit: 857,959 bytes in 12,109 blocks ==607967== total heap usage: 4,708,365 allocs, 4,696,256 frees, 9,014,460,651 bytes allocated ==607967== ==607967== LEAK SUMMARY: ==607967== definitely lost: 0 bytes in 0 blocks ==607967== indirectly lost: 0 bytes in 0 blocks ==607967== possibly lost: 0 bytes in 0 blocks ==607967== still reachable: 56 bytes in 3 blocks ==607967== suppressed: 857,903 bytes in 12,106 blocks ==607967== Reachable blocks (those to which a pointer was found) are not shown. ==607967== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==607967== ==607967== For lists of detected and suppressed errors, rerun with: -s ==607967== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)