==607853== Memcheck, a memory error detector ==607853== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==607853== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==607853== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==607853== Parent PID: 606210 ==607853== ==607853== ==607853== FILE DESCRIPTORS: 10 open (3 std) at exit. ==607853== Open file descriptor 12: ==607853== at 0xE90926D: pipe (pipe.c:29) ==607853== by 0x18AE307D: ??? ==607853== by 0x140804CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==607853== by 0x105A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==607853== by 0x10541D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==607853== by 0xF238D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==607853== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==607853== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==607853== by 0x13F45A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==607853== by 0x13820D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==607853== by 0x13AE66: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==607853== by 0x13AD06: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==607853== by 0x13B39D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==607853== by 0x136635: main (TestNodeBasedCellPopulationParallelMethods.cpp:19) ==607853== ==607853== Open file descriptor 8: /dev/shm/open_mpi.0000 ==607853== at 0xE90DC0C: __open_nocancel (open64_nocancel.c:39) ==607853== by 0xE891BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==607853== by 0xE49F822: ??? ==607853== by 0xE49F96F: ??? ==607853== by 0x141256DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==607853== by 0x14125938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==607853== by 0x140DB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==607853== by 0x140802DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==607853== by 0x105A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==607853== by 0x10541D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==607853== by 0xF238D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==607853== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==607853== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==607853== by 0x13F45A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==607853== by 0x13820D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==607853== by 0x13AE66: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==607853== by 0x13AD06: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==607853== by 0x13B39D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==607853== by 0x136635: main (TestNodeBasedCellPopulationParallelMethods.cpp:19) ==607853== ==607853== Open file descriptor 118: ==607853== ==607853== ==607853== Open file descriptor 114: ==607853== ==607853== ==607853== Open file descriptor 113: /etc/ssl/certs/ca-certificates.crt ==607853== ==607853== ==607853== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationParallelMethods_valgrind.txt ==607853== ==607853== ==607853== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==607853== ==607853== ==607853== ==607853== HEAP SUMMARY: ==607853== in use at exit: 858,019 bytes in 12,113 blocks ==607853== total heap usage: 68,163 allocs, 56,050 frees, 1,546,809,456 bytes allocated ==607853== ==607853== LEAK SUMMARY: ==607853== definitely lost: 0 bytes in 0 blocks ==607853== indirectly lost: 0 bytes in 0 blocks ==607853== possibly lost: 0 bytes in 0 blocks ==607853== still reachable: 56 bytes in 3 blocks ==607853== suppressed: 857,963 bytes in 12,110 blocks ==607853== Reachable blocks (those to which a pointer was found) are not shown. ==607853== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==607853== ==607853== For lists of detected and suppressed errors, rerun with: -s ==607853== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)