==607992== Memcheck, a memory error detector ==607992== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==607992== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==607992== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNumericalMethods -malloc_debug -malloc_dump -memory_info ==607992== Parent PID: 606210 ==607992== ==607992== ==607992== FILE DESCRIPTORS: 10 open (3 std) at exit. ==607992== Open file descriptor 12: ==607992== at 0xE90926D: pipe (pipe.c:29) ==607992== by 0x18AE307D: ??? ==607992== by 0x140804CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==607992== by 0x105A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==607992== by 0x10541D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==607992== by 0xF238D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==607992== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==607992== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==607992== by 0x13A5A4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==607992== by 0x13500D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==607992== by 0x137D30: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==607992== by 0x137BD0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==607992== by 0x138267: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==607992== by 0x133435: main (TestNumericalMethods.cpp:19) ==607992== ==607992== Open file descriptor 8: /dev/shm/open_mpi.0000 ==607992== at 0xE90DC0C: __open_nocancel (open64_nocancel.c:39) ==607992== by 0xE891BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==607992== by 0xE49F822: ??? ==607992== by 0xE49F96F: ??? ==607992== by 0x141256DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==607992== by 0x14125938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==607992== by 0x140DB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==607992== by 0x140802DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==607992== by 0x105A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==607992== by 0x10541D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==607992== by 0xF238D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==607992== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==607992== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==607992== by 0x13A5A4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==607992== by 0x13500D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==607992== by 0x137D30: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==607992== by 0x137BD0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==607992== by 0x138267: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==607992== by 0x133435: main (TestNumericalMethods.cpp:19) ==607992== ==607992== Open file descriptor 118: ==607992== ==607992== ==607992== Open file descriptor 114: ==607992== ==607992== ==607992== Open file descriptor 113: /etc/ssl/certs/ca-certificates.crt ==607992== ==607992== ==607992== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNumericalMethods_valgrind.txt ==607992== ==607992== ==607992== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==607992== ==607992== ==607992== ==607992== HEAP SUMMARY: ==607992== in use at exit: 858,019 bytes in 12,113 blocks ==607992== total heap usage: 77,295 allocs, 65,182 frees, 1,546,277,898 bytes allocated ==607992== ==607992== LEAK SUMMARY: ==607992== definitely lost: 0 bytes in 0 blocks ==607992== indirectly lost: 0 bytes in 0 blocks ==607992== possibly lost: 0 bytes in 0 blocks ==607992== still reachable: 56 bytes in 3 blocks ==607992== suppressed: 857,963 bytes in 12,110 blocks ==607992== Reachable blocks (those to which a pointer was found) are not shown. ==607992== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==607992== ==607992== For lists of detected and suppressed errors, rerun with: -s ==607992== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)