==607994== Memcheck, a memory error detector ==607994== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==607994== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==607994== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation3d -malloc_debug -malloc_dump -memory_info ==607994== Parent PID: 606210 ==607994== ==607994== ==607994== FILE DESCRIPTORS: 10 open (3 std) at exit. ==607994== Open file descriptor 12: ==607994== at 0xFE0226D: pipe (pipe.c:29) ==607994== by 0x18AE107D: ??? ==607994== by 0x1402F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==607994== by 0xF968418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==607994== by 0xF901D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==607994== by 0xE5F8D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==607994== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==607994== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==607994== by 0x1FF445: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==607994== by 0x1F941F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==607994== by 0x1FC6D0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==607994== by 0x1FC5CC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==607994== by 0x1FCBDF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==607994== by 0x1F7C15: main (TestOffLatticeSimulation3d.cpp:18) ==607994== ==607994== Open file descriptor 8: /dev/shm/open_mpi.0000 ==607994== at 0xFE06C0C: __open_nocancel (open64_nocancel.c:39) ==607994== by 0xFD8ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==607994== by 0xE49F822: ??? ==607994== by 0xE49F96F: ??? ==607994== by 0x140D46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==607994== by 0x140D4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==607994== by 0x1408A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==607994== by 0x1402F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==607994== by 0xF968418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==607994== by 0xF901D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==607994== by 0xE5F8D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==607994== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==607994== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==607994== by 0x1FF445: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==607994== by 0x1F941F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==607994== by 0x1FC6D0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==607994== by 0x1FC5CC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==607994== by 0x1FCBDF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==607994== by 0x1F7C15: main (TestOffLatticeSimulation3d.cpp:18) ==607994== ==607994== Open file descriptor 118: ==607994== ==607994== ==607994== Open file descriptor 114: ==607994== ==607994== ==607994== Open file descriptor 113: /etc/ssl/certs/ca-certificates.crt ==607994== ==607994== ==607994== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation3d_valgrind.txt ==607994== ==607994== ==607994== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==607994== ==607994== ==607994== ==607994== HEAP SUMMARY: ==607994== in use at exit: 858,019 bytes in 12,113 blocks ==607994== total heap usage: 824,336 allocs, 812,223 frees, 1,706,644,529 bytes allocated ==607994== ==607994== LEAK SUMMARY: ==607994== definitely lost: 0 bytes in 0 blocks ==607994== indirectly lost: 0 bytes in 0 blocks ==607994== possibly lost: 0 bytes in 0 blocks ==607994== still reachable: 56 bytes in 3 blocks ==607994== suppressed: 857,963 bytes in 12,110 blocks ==607994== Reachable blocks (those to which a pointer was found) are not shown. ==607994== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==607994== ==607994== For lists of detected and suppressed errors, rerun with: -s ==607994== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)