==609820== Memcheck, a memory error detector ==609820== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==609820== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==609820== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==609820== Parent PID: 606210 ==609820== ==609820== ==609820== FILE DESCRIPTORS: 10 open (3 std) at exit. ==609820== Open file descriptor 12: ==609820== at 0xECA526D: pipe (pipe.c:29) ==609820== by 0x18AE107D: ??? ==609820== by 0x140844CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==609820== by 0x105A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==609820== by 0x10541D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==609820== by 0xF236D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==609820== by 0xE807153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==609820== by 0xE8071A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==609820== by 0x13578E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==609820== by 0x130383: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==609820== by 0x132FA4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==609820== by 0x132E44: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==609820== by 0x1334DB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==609820== by 0x12E775: main (TestOnLatticeSimulationWithPdes.cpp:19) ==609820== ==609820== Open file descriptor 8: /dev/shm/open_mpi.0000 ==609820== at 0xECA9C0C: __open_nocancel (open64_nocancel.c:39) ==609820== by 0xEC2DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==609820== by 0xE83B822: ??? ==609820== by 0xE83B96F: ??? ==609820== by 0x141296DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==609820== by 0x14129938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==609820== by 0x140DF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==609820== by 0x140842DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==609820== by 0x105A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==609820== by 0x10541D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==609820== by 0xF236D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==609820== by 0xE807153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==609820== by 0xE8071A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==609820== by 0x13578E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==609820== by 0x130383: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==609820== by 0x132FA4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==609820== by 0x132E44: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==609820== by 0x1334DB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==609820== by 0x12E775: main (TestOnLatticeSimulationWithPdes.cpp:19) ==609820== ==609820== Open file descriptor 118: ==609820== ==609820== ==609820== Open file descriptor 114: ==609820== ==609820== ==609820== Open file descriptor 113: /etc/ssl/certs/ca-certificates.crt ==609820== ==609820== ==609820== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==609820== ==609820== ==609820== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==609820== ==609820== ==609820== ==609820== HEAP SUMMARY: ==609820== in use at exit: 857,959 bytes in 12,109 blocks ==609820== total heap usage: 1,906,515 allocs, 1,894,406 frees, 1,960,986,043 bytes allocated ==609820== ==609820== LEAK SUMMARY: ==609820== definitely lost: 0 bytes in 0 blocks ==609820== indirectly lost: 0 bytes in 0 blocks ==609820== possibly lost: 0 bytes in 0 blocks ==609820== still reachable: 56 bytes in 3 blocks ==609820== suppressed: 857,903 bytes in 12,106 blocks ==609820== Reachable blocks (those to which a pointer was found) are not shown. ==609820== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==609820== ==609820== For lists of detected and suppressed errors, rerun with: -s ==609820== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)