==483023== Memcheck, a memory error detector ==483023== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==483023== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==483023== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==483023== Parent PID: 481481 ==483023== ==483023== ==483023== FILE DESCRIPTORS: 10 open (3 std) at exit. ==483023== Open file descriptor 12: ==483023== at 0xD2EF26D: pipe (pipe.c:29) ==483023== by 0x18A1E07D: ??? ==483023== by 0x1402F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==483023== by 0x10816418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==483023== by 0x107AFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==483023== by 0xF4A6D38: PetscInitialize (pinit.c:924) ==483023== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==483023== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==483023== by 0x132B46: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==483023== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==483023== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==483023== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==483023== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==483023== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==483023== ==483023== Open file descriptor 8: /dev/shm/open_mpi.0000 ==483023== at 0xD2F3C0C: __open_nocancel (open64_nocancel.c:39) ==483023== by 0xD277BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==483023== by 0xCBDE822: ??? ==483023== by 0xCBDE96F: ??? ==483023== by 0x140D46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==483023== by 0x140D4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==483023== by 0x1408A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==483023== by 0x1402F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==483023== by 0x10816418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==483023== by 0x107AFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==483023== by 0xF4A6D38: PetscInitialize (pinit.c:924) ==483023== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==483023== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==483023== by 0x132B46: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==483023== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==483023== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==483023== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==483023== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==483023== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==483023== ==483023== Open file descriptor 126: /usr/share/ca-certificates/mozilla/HiPKI_Root_CA_-_G1.crt ==483023== ==483023== ==483023== Open file descriptor 118: ==483023== ==483023== ==483023== Open file descriptor 115: ==483023== ==483023== ==483023== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==483023== ==483023== ==483023== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==483023== ==483023== ==483023== ==483023== HEAP SUMMARY: ==483023== in use at exit: 835,628 bytes in 11,677 blocks ==483023== total heap usage: 63,564 allocs, 51,887 frees, 1,540,879,431 bytes allocated ==483023== ==483023== LEAK SUMMARY: ==483023== definitely lost: 0 bytes in 0 blocks ==483023== indirectly lost: 0 bytes in 0 blocks ==483023== possibly lost: 0 bytes in 0 blocks ==483023== still reachable: 56 bytes in 3 blocks ==483023== suppressed: 835,572 bytes in 11,674 blocks ==483023== Reachable blocks (those to which a pointer was found) are not shown. ==483023== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==483023== ==483023== For lists of detected and suppressed errors, rerun with: -s ==483023== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)