==497078== Memcheck, a memory error detector ==497078== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==497078== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==497078== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==497078== Parent PID: 481481 ==497078== ==497078== ==497078== FILE DESCRIPTORS: 10 open (3 std) at exit. ==497078== Open file descriptor 12: ==497078== at 0x102A926D: pipe (pipe.c:29) ==497078== by 0x1A6E107D: ??? ==497078== by 0x148904CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==497078== by 0xFBB1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==497078== by 0xFB4AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==497078== by 0xE841D38: PetscInitialize (pinit.c:924) ==497078== by 0xE6A9153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==497078== by 0xE6A91A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==497078== by 0x192669: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==497078== by 0x18A60B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==497078== by 0x18DC08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==497078== by 0x18DAA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==497078== by 0x18E13F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==497078== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==497078== ==497078== Open file descriptor 8: /dev/shm/open_mpi.0000 ==497078== at 0x102ADC0C: __open_nocancel (open64_nocancel.c:39) ==497078== by 0x10231BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==497078== by 0xE6E3822: ??? ==497078== by 0xE6E396F: ??? ==497078== by 0x149356DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==497078== by 0x14935938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==497078== by 0x148EB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==497078== by 0x148902DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==497078== by 0xFBB1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==497078== by 0xFB4AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==497078== by 0xE841D38: PetscInitialize (pinit.c:924) ==497078== by 0xE6A9153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==497078== by 0xE6A91A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==497078== by 0x192669: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==497078== by 0x18A60B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==497078== by 0x18DC08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==497078== by 0x18DAA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==497078== by 0x18E13F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==497078== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==497078== ==497078== Open file descriptor 126: /usr/share/ca-certificates/mozilla/HiPKI_Root_CA_-_G1.crt ==497078== ==497078== ==497078== Open file descriptor 118: ==497078== ==497078== ==497078== Open file descriptor 115: ==497078== ==497078== ==497078== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==497078== ==497078== ==497078== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==497078== ==497078== ==497078== ==497078== HEAP SUMMARY: ==497078== in use at exit: 835,708 bytes in 11,678 blocks ==497078== total heap usage: 869,837 allocs, 858,159 frees, 1,662,608,594 bytes allocated ==497078== ==497078== LEAK SUMMARY: ==497078== definitely lost: 0 bytes in 0 blocks ==497078== indirectly lost: 0 bytes in 0 blocks ==497078== possibly lost: 0 bytes in 0 blocks ==497078== still reachable: 120 bytes in 4 blocks ==497078== suppressed: 835,588 bytes in 11,674 blocks ==497078== Reachable blocks (those to which a pointer was found) are not shown. ==497078== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==497078== ==497078== For lists of detected and suppressed errors, rerun with: -s ==497078== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)