==483689== Memcheck, a memory error detector ==483689== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==483689== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==483689== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==483689== Parent PID: 481481 ==483689== ==483689== ==483689== FILE DESCRIPTORS: 10 open (3 std) at exit. ==483689== Open file descriptor 12: ==483689== at 0x1015626D: pipe (pipe.c:29) ==483689== by 0x18A1E07D: ??? ==483689== by 0x13F8F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==483689== by 0xF977418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==483689== by 0xF910D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==483689== by 0xE607D38: PetscInitialize (pinit.c:924) ==483689== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==483689== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==483689== by 0x1FFF0F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==483689== by 0x1F9AB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==483689== by 0x1FD424: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==483689== by 0x1FD2C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==483689== by 0x1FD95B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==483689== by 0x1F7ED5: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==483689== ==483689== Open file descriptor 8: /dev/shm/open_mpi.0000 ==483689== at 0x1015AC0C: __open_nocancel (open64_nocancel.c:39) ==483689== by 0x100DEBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==483689== by 0xE4A9822: ??? ==483689== by 0xE4A996F: ??? ==483689== by 0x140346DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==483689== by 0x14034938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==483689== by 0x13FEA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==483689== by 0x13F8F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==483689== by 0xF977418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==483689== by 0xF910D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==483689== by 0xE607D38: PetscInitialize (pinit.c:924) ==483689== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==483689== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==483689== by 0x1FFF0F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==483689== by 0x1F9AB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==483689== by 0x1FD424: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==483689== by 0x1FD2C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==483689== by 0x1FD95B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==483689== by 0x1F7ED5: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==483689== ==483689== Open file descriptor 126: /usr/share/ca-certificates/mozilla/HiPKI_Root_CA_-_G1.crt ==483689== ==483689== ==483689== Open file descriptor 118: ==483689== ==483689== ==483689== Open file descriptor 115: ==483689== ==483689== ==483689== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==483689== ==483689== ==483689== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==483689== ==483689== ==483689== ==483689== HEAP SUMMARY: ==483689== in use at exit: 835,562 bytes in 11,673 blocks ==483689== total heap usage: 9,757,393 allocs, 9,745,720 frees, 2,803,475,479 bytes allocated ==483689== ==483689== LEAK SUMMARY: ==483689== definitely lost: 0 bytes in 0 blocks ==483689== indirectly lost: 0 bytes in 0 blocks ==483689== possibly lost: 0 bytes in 0 blocks ==483689== still reachable: 56 bytes in 3 blocks ==483689== suppressed: 835,506 bytes in 11,670 blocks ==483689== Reachable blocks (those to which a pointer was found) are not shown. ==483689== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==483689== ==483689== For lists of detected and suppressed errors, rerun with: -s ==483689== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)