==496892== Memcheck, a memory error detector ==496892== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==496892== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==496892== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==496892== Parent PID: 481481 ==496892== ==496892== ==496892== FILE DESCRIPTORS: 10 open (3 std) at exit. ==496892== Open file descriptor 12: ==496892== at 0x1002D26D: pipe (pipe.c:29) ==496892== by 0x18A1E07D: ??? ==496892== by 0x13F8F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==496892== by 0xF935418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==496892== by 0xF8CED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==496892== by 0xE597D38: PetscInitialize (pinit.c:924) ==496892== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==496892== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==496892== by 0x1222CD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==496892== by 0x11D84D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==496892== by 0x11FE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==496892== by 0x11FCDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==496892== by 0x120373: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==496892== by 0x11BC75: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==496892== ==496892== Open file descriptor 8: /dev/shm/open_mpi.0000 ==496892== at 0x10031C0C: __open_nocancel (open64_nocancel.c:39) ==496892== by 0xFFB5BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==496892== by 0xF827822: ??? ==496892== by 0xF82796F: ??? ==496892== by 0x140346DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==496892== by 0x14034938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==496892== by 0x13FEA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==496892== by 0x13F8F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==496892== by 0xF935418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==496892== by 0xF8CED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==496892== by 0xE597D38: PetscInitialize (pinit.c:924) ==496892== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==496892== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==496892== by 0x1222CD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==496892== by 0x11D84D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==496892== by 0x11FE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==496892== by 0x11FCDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==496892== by 0x120373: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==496892== by 0x11BC75: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==496892== ==496892== Open file descriptor 126: /usr/share/ca-certificates/mozilla/HiPKI_Root_CA_-_G1.crt ==496892== ==496892== ==496892== Open file descriptor 118: ==496892== ==496892== ==496892== Open file descriptor 115: ==496892== ==496892== ==496892== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==496892== ==496892== ==496892== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==496892== ==496892== ==496892== ==496892== HEAP SUMMARY: ==496892== in use at exit: 835,562 bytes in 11,673 blocks ==496892== total heap usage: 3,345,629 allocs, 3,333,956 frees, 2,468,883,934 bytes allocated ==496892== ==496892== LEAK SUMMARY: ==496892== definitely lost: 0 bytes in 0 blocks ==496892== indirectly lost: 0 bytes in 0 blocks ==496892== possibly lost: 0 bytes in 0 blocks ==496892== still reachable: 56 bytes in 3 blocks ==496892== suppressed: 835,506 bytes in 11,670 blocks ==496892== Reachable blocks (those to which a pointer was found) are not shown. ==496892== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==496892== ==496892== For lists of detected and suppressed errors, rerun with: -s ==496892== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)