==518414== Memcheck, a memory error detector ==518414== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==518414== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==518414== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==518414== Parent PID: 516641 ==518414== ==518414== ==518414== FILE DESCRIPTORS: 9 open (3 std) at exit. ==518414== Open file descriptor 12: ==518414== at 0xEB7626D: pipe (pipe.c:29) ==518414== by 0x18A1E07D: ??? ==518414== by 0x1402F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==518414== by 0x10816418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==518414== by 0x107AFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==518414== by 0xF4A6D38: PetscInitialize (pinit.c:924) ==518414== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==518414== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==518414== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==518414== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==518414== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==518414== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==518414== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==518414== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==518414== ==518414== Open file descriptor 8: /dev/shm/open_mpi.0000 ==518414== at 0xEB7AC0C: __open_nocancel (open64_nocancel.c:39) ==518414== by 0xEAFEBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==518414== by 0xE4A9822: ??? ==518414== by 0xE4A996F: ??? ==518414== by 0x140D46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==518414== by 0x140D4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==518414== by 0x1408A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==518414== by 0x1402F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==518414== by 0x10816418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==518414== by 0x107AFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==518414== by 0xF4A6D38: PetscInitialize (pinit.c:924) ==518414== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==518414== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==518414== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==518414== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==518414== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==518414== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==518414== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==518414== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==518414== ==518414== Open file descriptor 116: ==518414== ==518414== ==518414== Open file descriptor 112: ==518414== ==518414== ==518414== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==518414== ==518414== ==518414== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==518414== ==518414== ==518414== ==518414== HEAP SUMMARY: ==518414== in use at exit: 835,628 bytes in 11,677 blocks ==518414== total heap usage: 1,132,960 allocs, 1,121,283 frees, 1,617,728,285 bytes allocated ==518414== ==518414== LEAK SUMMARY: ==518414== definitely lost: 0 bytes in 0 blocks ==518414== indirectly lost: 0 bytes in 0 blocks ==518414== possibly lost: 0 bytes in 0 blocks ==518414== still reachable: 56 bytes in 3 blocks ==518414== suppressed: 835,572 bytes in 11,674 blocks ==518414== Reachable blocks (those to which a pointer was found) are not shown. ==518414== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==518414== ==518414== For lists of detected and suppressed errors, rerun with: -s ==518414== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)