==517372== Memcheck, a memory error detector ==517372== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==517372== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==517372== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/ode/test/TestAbstractOdeSystem -malloc_debug -malloc_dump -memory_info ==517372== Parent PID: 516641 ==517372== ==517372== ==517372== FILE DESCRIPTORS: 9 open (3 std) at exit. ==517372== Open file descriptor 12: ==517372== at 0x641226D: pipe (pipe.c:29) ==517372== by 0xB1E307D: ??? ==517372== by 0x8CE84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==517372== by 0x6047418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==517372== by 0x5FE0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==517372== by 0x4CD7D38: PetscInitialize (pinit.c:924) ==517372== by 0x4B3D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==517372== by 0x4B3D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==517372== by 0x137AEF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==517372== by 0x1315E1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==517372== by 0x134746: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==517372== by 0x1345E6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==517372== by 0x134C7D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==517372== by 0x12EE55: main (TestAbstractOdeSystem.cpp:19) ==517372== ==517372== Open file descriptor 8: /dev/shm/open_mpi.0000 ==517372== at 0x6416C0C: __open_nocancel (open64_nocancel.c:39) ==517372== by 0x639ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==517372== by 0x4B77822: ??? ==517372== by 0x4B7796F: ??? ==517372== by 0x8D8D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==517372== by 0x8D8D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==517372== by 0x8D43922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==517372== by 0x8CE82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==517372== by 0x6047418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==517372== by 0x5FE0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==517372== by 0x4CD7D38: PetscInitialize (pinit.c:924) ==517372== by 0x4B3D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==517372== by 0x4B3D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==517372== by 0x137AEF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==517372== by 0x1315E1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==517372== by 0x134746: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==517372== by 0x1345E6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==517372== by 0x134C7D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==517372== by 0x12EE55: main (TestAbstractOdeSystem.cpp:19) ==517372== ==517372== Open file descriptor 116: ==517372== ==517372== ==517372== Open file descriptor 112: ==517372== ==517372== ==517372== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAbstractOdeSystem_valgrind.txt ==517372== ==517372== ==517372== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==517372== ==517372== ==517372== ==517372== HEAP SUMMARY: ==517372== in use at exit: 835,196 bytes in 11,676 blocks ==517372== total heap usage: 54,328 allocs, 42,652 frees, 1,540,079,273 bytes allocated ==517372== ==517372== LEAK SUMMARY: ==517372== definitely lost: 0 bytes in 0 blocks ==517372== indirectly lost: 0 bytes in 0 blocks ==517372== possibly lost: 0 bytes in 0 blocks ==517372== still reachable: 24 bytes in 2 blocks ==517372== suppressed: 835,172 bytes in 11,674 blocks ==517372== Reachable blocks (those to which a pointer was found) are not shown. ==517372== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==517372== ==517372== For lists of detected and suppressed errors, rerun with: -s ==517372== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)