==534862== Memcheck, a memory error detector ==534862== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==534862== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==534862== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCheckpointing -malloc_debug -malloc_dump -memory_info ==534862== Parent PID: 516641 ==534862== ==534862== ==534862== FILE DESCRIPTORS: 9 open (3 std) at exit. ==534862== Open file descriptor 12: ==534862== at 0xA43E26D: pipe (pipe.c:29) ==534862== by 0x13F9407D: ??? ==534862== by 0xF7B14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==534862== by 0xBB36418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==534862== by 0xBACFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==534862== by 0xA7C6D38: PetscInitialize (pinit.c:924) ==534862== by 0x9D1B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==534862== by 0x9D1B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==534862== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==534862== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==534862== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==534862== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==534862== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==534862== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==534862== ==534862== Open file descriptor 8: /dev/shm/open_mpi.0000 ==534862== at 0xA442C0C: __open_nocancel (open64_nocancel.c:39) ==534862== by 0xA3C6BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==534862== by 0x9D55822: ??? ==534862== by 0x9D5596F: ??? ==534862== by 0xF8566DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==534862== by 0xF856938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==534862== by 0xF80C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==534862== by 0xF7B12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==534862== by 0xBB36418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==534862== by 0xBACFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==534862== by 0xA7C6D38: PetscInitialize (pinit.c:924) ==534862== by 0x9D1B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==534862== by 0x9D1B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==534862== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==534862== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==534862== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==534862== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==534862== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==534862== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==534862== ==534862== Open file descriptor 116: ==534862== ==534862== ==534862== Open file descriptor 112: ==534862== ==534862== ==534862== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCheckpointing_valgrind.txt ==534862== ==534862== ==534862== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==534862== ==534862== ==534862== ==534862== HEAP SUMMARY: ==534862== in use at exit: 836,026 bytes in 11,682 blocks ==534862== total heap usage: 843,389 allocs, 831,707 frees, 1,645,480,837 bytes allocated ==534862== ==534862== LEAK SUMMARY: ==534862== definitely lost: 0 bytes in 0 blocks ==534862== indirectly lost: 0 bytes in 0 blocks ==534862== possibly lost: 0 bytes in 0 blocks ==534862== still reachable: 24 bytes in 2 blocks ==534862== suppressed: 836,002 bytes in 11,680 blocks ==534862== Reachable blocks (those to which a pointer was found) are not shown. ==534862== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==534862== ==534862== For lists of detected and suppressed errors, rerun with: -s ==534862== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 60 from 34)