==517842== Memcheck, a memory error detector ==517842== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==517842== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==517842== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedCellCycleModels -malloc_debug -malloc_dump -memory_info ==517842== Parent PID: 516641 ==517842== ==517842== ==517842== FILE DESCRIPTORS: 9 open (3 std) at exit. ==517842== Open file descriptor 12: ==517842== at 0xE6A426D: pipe (pipe.c:29) ==517842== by 0x18A1E07D: ??? ==517842== by 0x12FCE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==517842== by 0xE2F1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==517842== by 0xE28AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==517842== by 0xCF81D38: PetscInitialize (pinit.c:924) ==517842== by 0xCDE9153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==517842== by 0xCDE91A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==517842== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==517842== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==517842== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==517842== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==517842== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==517842== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==517842== ==517842== Open file descriptor 8: /dev/shm/open_mpi.0000 ==517842== at 0xE6A8C0C: __open_nocancel (open64_nocancel.c:39) ==517842== by 0xE62CBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==517842== by 0xCE23822: ??? ==517842== by 0xCE2396F: ??? ==517842== by 0x130736DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==517842== by 0x13073938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==517842== by 0x13029922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==517842== by 0x12FCE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==517842== by 0xE2F1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==517842== by 0xE28AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==517842== by 0xCF81D38: PetscInitialize (pinit.c:924) ==517842== by 0xCDE9153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==517842== by 0xCDE91A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==517842== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==517842== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==517842== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==517842== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==517842== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==517842== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==517842== ==517842== Open file descriptor 116: ==517842== ==517842== ==517842== Open file descriptor 112: ==517842== ==517842== ==517842== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModels_valgrind.txt ==517842== ==517842== ==517842== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==517842== ==517842== ==517842== ==517842== HEAP SUMMARY: ==517842== in use at exit: 835,578 bytes in 11,674 blocks ==517842== total heap usage: 4,187,130 allocs, 4,175,456 frees, 1,971,771,870 bytes allocated ==517842== ==517842== LEAK SUMMARY: ==517842== definitely lost: 0 bytes in 0 blocks ==517842== indirectly lost: 0 bytes in 0 blocks ==517842== possibly lost: 0 bytes in 0 blocks ==517842== still reachable: 72 bytes in 4 blocks ==517842== suppressed: 835,506 bytes in 11,670 blocks ==517842== Reachable blocks (those to which a pointer was found) are not shown. ==517842== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==517842== ==517842== For lists of detected and suppressed errors, rerun with: -s ==517842== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)