==518483== Memcheck, a memory error detector ==518483== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==518483== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==518483== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==518483== Parent PID: 516641 ==518483== ==518483== ==518483== FILE DESCRIPTORS: 9 open (3 std) at exit. ==518483== Open file descriptor 12: ==518483== at 0xECA126D: pipe (pipe.c:29) ==518483== by 0x18A1E07D: ??? ==518483== by 0x1402F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==518483== by 0x108FD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==518483== by 0x10896D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==518483== by 0xF58DD38: PetscInitialize (pinit.c:924) ==518483== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==518483== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==518483== by 0x311532: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==518483== by 0x307AD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==518483== by 0x30BEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==518483== by 0x30BD80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==518483== by 0x30C417: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==518483== by 0x305EF5: main (TestOffLatticeSimulation.cpp:19) ==518483== ==518483== Open file descriptor 8: /dev/shm/open_mpi.0000 ==518483== at 0xECA5C0C: __open_nocancel (open64_nocancel.c:39) ==518483== by 0xEC29BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==518483== by 0xE4A9822: ??? ==518483== by 0xE4A996F: ??? ==518483== by 0x140D46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==518483== by 0x140D4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==518483== by 0x1408A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==518483== by 0x1402F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==518483== by 0x108FD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==518483== by 0x10896D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==518483== by 0xF58DD38: PetscInitialize (pinit.c:924) ==518483== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==518483== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==518483== by 0x311532: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==518483== by 0x307AD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==518483== by 0x30BEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==518483== by 0x30BD80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==518483== by 0x30C417: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==518483== by 0x305EF5: main (TestOffLatticeSimulation.cpp:19) ==518483== ==518483== Open file descriptor 116: ==518483== ==518483== ==518483== Open file descriptor 112: ==518483== ==518483== ==518483== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==518483== ==518483== ==518483== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==518483== ==518483== ==518483== ==518483== HEAP SUMMARY: ==518483== in use at exit: 835,562 bytes in 11,673 blocks ==518483== total heap usage: 12,871,102 allocs, 12,859,429 frees, 4,065,135,937 bytes allocated ==518483== ==518483== LEAK SUMMARY: ==518483== definitely lost: 0 bytes in 0 blocks ==518483== indirectly lost: 0 bytes in 0 blocks ==518483== possibly lost: 0 bytes in 0 blocks ==518483== still reachable: 56 bytes in 3 blocks ==518483== suppressed: 835,506 bytes in 11,670 blocks ==518483== Reachable blocks (those to which a pointer was found) are not shown. ==518483== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==518483== ==518483== For lists of detected and suppressed errors, rerun with: -s ==518483== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)