==517940== Memcheck, a memory error detector ==517940== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==517940== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==517940== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==517940== Parent PID: 516641 ==517940== ==517940== ==517940== FILE DESCRIPTORS: 9 open (3 std) at exit. ==517940== Open file descriptor 12: ==517940== at 0x103CA26D: pipe (pipe.c:29) ==517940== by 0x18A1E07D: ??? ==517940== by 0x13F8F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==517940== by 0xFCD2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==517940== by 0xFC6BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==517940== by 0xE934D38: PetscInitialize (pinit.c:924) ==517940== by 0xE80C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==517940== by 0xE80C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==517940== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==517940== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==517940== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==517940== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==517940== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==517940== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==517940== ==517940== Open file descriptor 8: /dev/shm/open_mpi.0000 ==517940== at 0x103CEC0C: __open_nocancel (open64_nocancel.c:39) ==517940== by 0x10352BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==517940== by 0xFBC4822: ??? ==517940== by 0xFBC496F: ??? ==517940== by 0x140346DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==517940== by 0x14034938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==517940== by 0x13FEA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==517940== by 0x13F8F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==517940== by 0xFCD2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==517940== by 0xFC6BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==517940== by 0xE934D38: PetscInitialize (pinit.c:924) ==517940== by 0xE80C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==517940== by 0xE80C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==517940== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==517940== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==517940== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==517940== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==517940== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==517940== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==517940== ==517940== Open file descriptor 116: ==517940== ==517940== ==517940== Open file descriptor 112: ==517940== ==517940== ==517940== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==517940== ==517940== ==517940== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==517940== ==517940== ==517940== ==517940== HEAP SUMMARY: ==517940== in use at exit: 835,562 bytes in 11,673 blocks ==517940== total heap usage: 7,738,999 allocs, 7,727,326 frees, 2,384,196,402 bytes allocated ==517940== ==517940== LEAK SUMMARY: ==517940== definitely lost: 0 bytes in 0 blocks ==517940== indirectly lost: 0 bytes in 0 blocks ==517940== possibly lost: 0 bytes in 0 blocks ==517940== still reachable: 56 bytes in 3 blocks ==517940== suppressed: 835,506 bytes in 11,670 blocks ==517940== Reachable blocks (those to which a pointer was found) are not shown. ==517940== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==517940== ==517940== For lists of detected and suppressed errors, rerun with: -s ==517940== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)