==572577== Memcheck, a memory error detector ==572577== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==572577== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==572577== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==572577== Parent PID: 556816 ==572577== ==572577== ==572577== FILE DESCRIPTORS: 9 open (3 std) at exit. ==572577== Open file descriptor 12: ==572577== at 0x1056126D: pipe (pipe.c:29) ==572577== by 0x1A6E207D: ??? ==572577== by 0x158F04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==572577== by 0x121BD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==572577== by 0x12156D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==572577== by 0x10E4DD38: PetscInitialize (pinit.c:924) ==572577== by 0xFD2F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==572577== by 0xFD2F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==572577== by 0x23B368: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==572577== by 0x231839: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==572577== by 0x235F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==572577== by 0x235E0A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==572577== by 0x2364A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==572577== by 0x22FC55: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==572577== ==572577== Open file descriptor 8: /dev/shm/open_mpi.0000 ==572577== at 0x10565C0C: __open_nocancel (open64_nocancel.c:39) ==572577== by 0x104E9BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==572577== by 0xFD69822: ??? ==572577== by 0xFD6996F: ??? ==572577== by 0x159956DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==572577== by 0x15995938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==572577== by 0x1594B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==572577== by 0x158F02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==572577== by 0x121BD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==572577== by 0x12156D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==572577== by 0x10E4DD38: PetscInitialize (pinit.c:924) ==572577== by 0xFD2F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==572577== by 0xFD2F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==572577== by 0x23B368: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==572577== by 0x231839: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==572577== by 0x235F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==572577== by 0x235E0A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==572577== by 0x2364A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==572577== by 0x22FC55: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==572577== ==572577== Open file descriptor 116: ==572577== ==572577== ==572577== Open file descriptor 112: ==572577== ==572577== ==572577== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==572577== ==572577== ==572577== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==572577== ==572577== ==572577== ==572577== HEAP SUMMARY: ==572577== in use at exit: 835,578 bytes in 11,673 blocks ==572577== total heap usage: 6,319,242 allocs, 6,307,569 frees, 2,259,458,449 bytes allocated ==572577== ==572577== LEAK SUMMARY: ==572577== definitely lost: 0 bytes in 0 blocks ==572577== indirectly lost: 0 bytes in 0 blocks ==572577== possibly lost: 0 bytes in 0 blocks ==572577== still reachable: 56 bytes in 3 blocks ==572577== suppressed: 835,522 bytes in 11,670 blocks ==572577== Reachable blocks (those to which a pointer was found) are not shown. ==572577== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==572577== ==572577== For lists of detected and suppressed errors, rerun with: -s ==572577== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)