==558485== Memcheck, a memory error detector ==558485== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==558485== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==558485== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulationWithGhostNodes -malloc_debug -malloc_dump -memory_info ==558485== Parent PID: 556816 ==558485== ==558485== ==558485== FILE DESCRIPTORS: 9 open (3 std) at exit. ==558485== Open file descriptor 12: ==558485== at 0x1011426D: pipe (pipe.c:29) ==558485== by 0x18A1E07D: ??? ==558485== by 0x13F8F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==558485== by 0xF935418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==558485== by 0xF8CED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==558485== by 0xE597D38: PetscInitialize (pinit.c:924) ==558485== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==558485== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==558485== by 0x159CA9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==558485== by 0x1521AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==558485== by 0x15565A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==558485== by 0x1554FA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==558485== by 0x155B91: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==558485== by 0x1505D5: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==558485== ==558485== Open file descriptor 8: /dev/shm/open_mpi.0000 ==558485== at 0x10118C0C: __open_nocancel (open64_nocancel.c:39) ==558485== by 0x1009CBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==558485== by 0xF827822: ??? ==558485== by 0xF82796F: ??? ==558485== by 0x140346DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==558485== by 0x14034938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==558485== by 0x13FEA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==558485== by 0x13F8F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==558485== by 0xF935418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==558485== by 0xF8CED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==558485== by 0xE597D38: PetscInitialize (pinit.c:924) ==558485== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==558485== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==558485== by 0x159CA9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==558485== by 0x1521AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==558485== by 0x15565A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==558485== by 0x1554FA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==558485== by 0x155B91: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==558485== by 0x1505D5: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==558485== ==558485== Open file descriptor 116: ==558485== ==558485== ==558485== Open file descriptor 112: ==558485== ==558485== ==558485== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulationWithGhostNodes_valgrind.txt ==558485== ==558485== ==558485== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==558485== ==558485== ==558485== ==558485== HEAP SUMMARY: ==558485== in use at exit: 835,628 bytes in 11,677 blocks ==558485== total heap usage: 229,510 allocs, 217,833 frees, 1,565,377,666 bytes allocated ==558485== ==558485== LEAK SUMMARY: ==558485== definitely lost: 0 bytes in 0 blocks ==558485== indirectly lost: 0 bytes in 0 blocks ==558485== possibly lost: 0 bytes in 0 blocks ==558485== still reachable: 56 bytes in 3 blocks ==558485== suppressed: 835,572 bytes in 11,674 blocks ==558485== Reachable blocks (those to which a pointer was found) are not shown. ==558485== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==558485== ==558485== For lists of detected and suppressed errors, rerun with: -s ==558485== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)