==558023== Memcheck, a memory error detector ==558023== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==558023== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==558023== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedSrnModels -malloc_debug -malloc_dump -memory_info ==558023== Parent PID: 556816 ==558023== ==558023== ==558023== FILE DESCRIPTORS: 9 open (3 std) at exit. ==558023== Open file descriptor 12: ==558023== at 0xE45F26D: pipe (pipe.c:29) ==558023== by 0x18A1E07D: ??? ==558023== by 0x12F7D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==558023== by 0xE0AE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==558023== by 0xE047D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==558023== by 0xCD3ED38: PetscInitialize (pinit.c:924) ==558023== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==558023== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==558023== by 0x12E3B1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==558023== by 0x1272FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==558023== by 0x129E8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==558023== by 0x129D2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==558023== by 0x12A3C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==558023== by 0x125725: main (TestOdeBasedSrnModels.cpp:19) ==558023== ==558023== Open file descriptor 8: /dev/shm/open_mpi.0000 ==558023== at 0xE463C0C: __open_nocancel (open64_nocancel.c:39) ==558023== by 0xE3E7BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==558023== by 0xCBDE822: ??? ==558023== by 0xCBDE96F: ??? ==558023== by 0x130226DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==558023== by 0x13022938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==558023== by 0x12FD8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==558023== by 0x12F7D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==558023== by 0xE0AE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==558023== by 0xE047D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==558023== by 0xCD3ED38: PetscInitialize (pinit.c:924) ==558023== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==558023== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==558023== by 0x12E3B1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==558023== by 0x1272FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==558023== by 0x129E8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==558023== by 0x129D2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==558023== by 0x12A3C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==558023== by 0x125725: main (TestOdeBasedSrnModels.cpp:19) ==558023== ==558023== Open file descriptor 116: ==558023== ==558023== ==558023== Open file descriptor 112: ==558023== ==558023== ==558023== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedSrnModels_valgrind.txt ==558023== ==558023== ==558023== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==558023== ==558023== ==558023== ==558023== HEAP SUMMARY: ==558023== in use at exit: 835,644 bytes in 11,678 blocks ==558023== total heap usage: 65,057 allocs, 53,379 frees, 1,541,166,590 bytes allocated ==558023== ==558023== LEAK SUMMARY: ==558023== definitely lost: 0 bytes in 0 blocks ==558023== indirectly lost: 0 bytes in 0 blocks ==558023== possibly lost: 0 bytes in 0 blocks ==558023== still reachable: 72 bytes in 4 blocks ==558023== suppressed: 835,572 bytes in 11,674 blocks ==558023== Reachable blocks (those to which a pointer was found) are not shown. ==558023== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==558023== ==558023== For lists of detected and suppressed errors, rerun with: -s ==558023== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)