==557077== Memcheck, a memory error detector ==557077== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==557077== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==557077== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/io/test/TestParallelColumnDataReaderWriter -malloc_debug -malloc_dump -memory_info ==557077== Parent PID: 556816 ==557077== ==557077== ==557077== FILE DESCRIPTORS: 9 open (3 std) at exit. ==557077== Open file descriptor 12: ==557077== at 0x60AF26D: pipe (pipe.c:29) ==557077== by 0xAF1607D: ??? ==557077== by 0x8F454CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==557077== by 0x665E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==557077== by 0x65F7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==557077== by 0x4A95D38: PetscInitialize (pinit.c:924) ==557077== by 0x496D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==557077== by 0x496D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==557077== by 0x11B354: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==557077== by 0x114A4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==557077== by 0x1174D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==557077== by 0x117378: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==557077== by 0x117A0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==557077== by 0x112E75: main (TestParallelColumnDataReaderWriter.cpp:19) ==557077== ==557077== Open file descriptor 8: /dev/shm/open_mpi.0000 ==557077== at 0x60B3C0C: __open_nocancel (open64_nocancel.c:39) ==557077== by 0x6037BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==557077== by 0x5D25822: ??? ==557077== by 0x5D2596F: ??? ==557077== by 0x8FEA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==557077== by 0x8FEA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==557077== by 0x8FA0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==557077== by 0x8F452DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==557077== by 0x665E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==557077== by 0x65F7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==557077== by 0x4A95D38: PetscInitialize (pinit.c:924) ==557077== by 0x496D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==557077== by 0x496D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==557077== by 0x11B354: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==557077== by 0x114A4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==557077== by 0x1174D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==557077== by 0x117378: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==557077== by 0x117A0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==557077== by 0x112E75: main (TestParallelColumnDataReaderWriter.cpp:19) ==557077== ==557077== Open file descriptor 116: ==557077== ==557077== ==557077== Open file descriptor 112: ==557077== ==557077== ==557077== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestParallelColumnDataReaderWriter_valgrind.txt ==557077== ==557077== ==557077== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==557077== ==557077== ==557077== ==557077== HEAP SUMMARY: ==557077== in use at exit: 835,148 bytes in 11,676 blocks ==557077== total heap usage: 54,492 allocs, 42,816 frees, 1,540,533,283 bytes allocated ==557077== ==557077== LEAK SUMMARY: ==557077== definitely lost: 0 bytes in 0 blocks ==557077== indirectly lost: 0 bytes in 0 blocks ==557077== possibly lost: 0 bytes in 0 blocks ==557077== still reachable: 24 bytes in 2 blocks ==557077== suppressed: 835,124 bytes in 11,674 blocks ==557077== Reachable blocks (those to which a pointer was found) are not shown. ==557077== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==557077== ==557077== For lists of detected and suppressed errors, rerun with: -s ==557077== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)