==749639== Memcheck, a memory error detector ==749639== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==749639== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==749639== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==749639== Parent PID: 748033 ==749639== ==749639== ==749639== FILE DESCRIPTORS: 9 open (3 std) at exit. ==749639== Open file descriptor 12: ==749639== at 0xE8F326D: pipe (pipe.c:29) ==749639== by 0x18AE307D: ??? ==749639== by 0x140804CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==749639== by 0x104BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==749639== by 0x10458D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==749639== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==749639== by 0xE4FA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==749639== by 0xE4FA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==749639== by 0x2E24DE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==749639== by 0x2D9039: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==749639== by 0x2DD832: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==749639== by 0x2DD6D2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==749639== by 0x2DDD69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==749639== by 0x2D7455: main (TestNodeBasedCellPopulation.cpp:19) ==749639== ==749639== Open file descriptor 8: /dev/shm/open_mpi.0000 ==749639== at 0xE8F7C0C: __open_nocancel (open64_nocancel.c:39) ==749639== by 0xE87BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==749639== by 0xE52E822: ??? ==749639== by 0xE52E96F: ??? ==749639== by 0x141256DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==749639== by 0x14125938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==749639== by 0x140DB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==749639== by 0x140802DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==749639== by 0x104BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==749639== by 0x10458D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==749639== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==749639== by 0xE4FA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==749639== by 0xE4FA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==749639== by 0x2E24DE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==749639== by 0x2D9039: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==749639== by 0x2DD832: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==749639== by 0x2DD6D2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==749639== by 0x2DDD69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==749639== by 0x2D7455: main (TestNodeBasedCellPopulation.cpp:19) ==749639== ==749639== Open file descriptor 115: ==749639== ==749639== ==749639== Open file descriptor 112: ==749639== ==749639== ==749639== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==749639== ==749639== ==749639== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==749639== ==749639== ==749639== ==749639== HEAP SUMMARY: ==749639== in use at exit: 857,959 bytes in 12,109 blocks ==749639== total heap usage: 20,199,435 allocs, 20,187,326 frees, 2,767,278,392 bytes allocated ==749639== ==749639== LEAK SUMMARY: ==749639== definitely lost: 0 bytes in 0 blocks ==749639== indirectly lost: 0 bytes in 0 blocks ==749639== possibly lost: 0 bytes in 0 blocks ==749639== still reachable: 56 bytes in 3 blocks ==749639== suppressed: 857,903 bytes in 12,106 blocks ==749639== Reachable blocks (those to which a pointer was found) are not shown. ==749639== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==749639== ==749639== For lists of detected and suppressed errors, rerun with: -s ==749639== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)