==750058== Memcheck, a memory error detector ==750058== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==750058== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==750058== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==750058== Parent PID: 748033 ==750058== ==750058== ==750058== FILE DESCRIPTORS: 9 open (3 std) at exit. ==750058== Open file descriptor 12: ==750058== at 0xF10E26D: pipe (pipe.c:29) ==750058== by 0x18AE407D: ??? ==750058== by 0x141F44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==750058== by 0x10D69418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==750058== by 0x10D02D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==750058== by 0xF9F9D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==750058== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==750058== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==750058== by 0x1D33E2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==750058== by 0x1CCD79: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==750058== by 0x1D04B0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==750058== by 0x1D0350: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==750058== by 0x1D09E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==750058== by 0x1CB195: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==750058== ==750058== Open file descriptor 8: /dev/shm/open_mpi.0000 ==750058== at 0xF112C0C: __open_nocancel (open64_nocancel.c:39) ==750058== by 0xF096BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==750058== by 0xE49F822: ??? ==750058== by 0xE49F96F: ??? ==750058== by 0x142996DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==750058== by 0x14299938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==750058== by 0x1424F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==750058== by 0x141F42DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==750058== by 0x10D69418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==750058== by 0x10D02D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==750058== by 0xF9F9D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==750058== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==750058== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==750058== by 0x1D33E2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==750058== by 0x1CCD79: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==750058== by 0x1D04B0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==750058== by 0x1D0350: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==750058== by 0x1D09E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==750058== by 0x1CB195: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==750058== ==750058== Open file descriptor 115: ==750058== ==750058== ==750058== Open file descriptor 112: ==750058== ==750058== ==750058== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==750058== ==750058== ==750058== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==750058== ==750058== ==750058== ==750058== HEAP SUMMARY: ==750058== in use at exit: 857,959 bytes in 12,109 blocks ==750058== total heap usage: 6,555,876 allocs, 6,543,767 frees, 8,227,939,498 bytes allocated ==750058== ==750058== LEAK SUMMARY: ==750058== definitely lost: 0 bytes in 0 blocks ==750058== indirectly lost: 0 bytes in 0 blocks ==750058== possibly lost: 0 bytes in 0 blocks ==750058== still reachable: 56 bytes in 3 blocks ==750058== suppressed: 857,903 bytes in 12,106 blocks ==750058== Reachable blocks (those to which a pointer was found) are not shown. ==750058== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==750058== ==750058== For lists of detected and suppressed errors, rerun with: -s ==750058== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)