==749698== Memcheck, a memory error detector ==749698== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==749698== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==749698== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==749698== Parent PID: 748033 ==749698== ==749698== ==749698== FILE DESCRIPTORS: 9 open (3 std) at exit. ==749698== Open file descriptor 12: ==749698== at 0xFE0226D: pipe (pipe.c:29) ==749698== by 0x18AE107D: ??? ==749698== by 0x1402F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==749698== by 0xF968418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==749698== by 0xF901D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==749698== by 0xE5F8D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==749698== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==749698== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==749698== by 0x16AAB3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==749698== by 0x162E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==749698== by 0x1660EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==749698== by 0x165F8C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==749698== by 0x166623: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==749698== by 0x161225: main (TestPottsBasedCellPopulation.cpp:19) ==749698== ==749698== Open file descriptor 8: /dev/shm/open_mpi.0000 ==749698== at 0xFE06C0C: __open_nocancel (open64_nocancel.c:39) ==749698== by 0xFD8ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==749698== by 0xE49F822: ??? ==749698== by 0xE49F96F: ??? ==749698== by 0x140D46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==749698== by 0x140D4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==749698== by 0x1408A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==749698== by 0x1402F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==749698== by 0xF968418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==749698== by 0xF901D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==749698== by 0xE5F8D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==749698== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==749698== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==749698== by 0x16AAB3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==749698== by 0x162E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==749698== by 0x1660EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==749698== by 0x165F8C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==749698== by 0x166623: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==749698== by 0x161225: main (TestPottsBasedCellPopulation.cpp:19) ==749698== ==749698== Open file descriptor 115: ==749698== ==749698== ==749698== Open file descriptor 112: ==749698== ==749698== ==749698== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsBasedCellPopulation_valgrind.txt ==749698== ==749698== ==749698== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==749698== ==749698== ==749698== ==749698== HEAP SUMMARY: ==749698== in use at exit: 858,019 bytes in 12,113 blocks ==749698== total heap usage: 80,416 allocs, 68,303 frees, 1,548,275,515 bytes allocated ==749698== ==749698== LEAK SUMMARY: ==749698== definitely lost: 0 bytes in 0 blocks ==749698== indirectly lost: 0 bytes in 0 blocks ==749698== possibly lost: 0 bytes in 0 blocks ==749698== still reachable: 56 bytes in 3 blocks ==749698== suppressed: 857,963 bytes in 12,110 blocks ==749698== Reachable blocks (those to which a pointer was found) are not shown. ==749698== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==749698== ==749698== For lists of detected and suppressed errors, rerun with: -s ==749698== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)