==756753== Memcheck, a memory error detector ==756753== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==756753== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==756753== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningTumourSpheroidSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==756753== Parent PID: 748033 ==756753== ==756753== ==756753== FILE DESCRIPTORS: 9 open (3 std) at exit. ==756753== Open file descriptor 12: ==756753== at 0xEBBE26D: pipe (pipe.c:29) ==756753== by 0x18AE107D: ??? ==756753== by 0x140844CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==756753== by 0x104BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==756753== by 0x10458D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==756753== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==756753== by 0xE807153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==756753== by 0xE8071A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==756753== by 0x11C9B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==756753== by 0x1182D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==756753== by 0x11A55A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==756753== by 0x11A455: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==756753== by 0x11AA69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==756753== by 0x116AD5: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==756753== ==756753== Open file descriptor 8: /dev/shm/open_mpi.0000 ==756753== at 0xEBC2C0C: __open_nocancel (open64_nocancel.c:39) ==756753== by 0xEB46BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==756753== by 0xE83B822: ??? ==756753== by 0xE83B96F: ??? ==756753== by 0x141296DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==756753== by 0x14129938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==756753== by 0x140DF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==756753== by 0x140842DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==756753== by 0x104BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==756753== by 0x10458D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==756753== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==756753== by 0xE807153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==756753== by 0xE8071A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==756753== by 0x11C9B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==756753== by 0x1182D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==756753== by 0x11A55A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==756753== by 0x11A455: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==756753== by 0x11AA69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==756753== by 0x116AD5: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==756753== ==756753== Open file descriptor 115: ==756753== ==756753== ==756753== Open file descriptor 112: ==756753== ==756753== ==756753== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningTumourSpheroidSimulationsTutorial_valgrind.txt ==756753== ==756753== ==756753== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==756753== ==756753== ==756753== ==756753== HEAP SUMMARY: ==756753== in use at exit: 857,959 bytes in 12,109 blocks ==756753== total heap usage: 1,817,878 allocs, 1,805,769 frees, 1,867,330,398 bytes allocated ==756753== ==756753== LEAK SUMMARY: ==756753== definitely lost: 0 bytes in 0 blocks ==756753== indirectly lost: 0 bytes in 0 blocks ==756753== possibly lost: 0 bytes in 0 blocks ==756753== still reachable: 56 bytes in 3 blocks ==756753== suppressed: 857,903 bytes in 12,106 blocks ==756753== Reachable blocks (those to which a pointer was found) are not shown. ==756753== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==756753== ==756753== For lists of detected and suppressed errors, rerun with: -s ==756753== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)