==349289== Memcheck, a memory error detector ==349289== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==349289== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==349289== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==349289== Parent PID: 347681 ==349289== ==349289== ==349289== FILE DESCRIPTORS: 10 open (3 std) at exit. ==349289== Open file descriptor 12: ==349289== at 0xEBB026D: pipe (pipe.c:29) ==349289== by 0x18A2007D: ??? ==349289== by 0x140294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==349289== by 0x1080E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349289== by 0x107A7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349289== by 0xF49CD38: PetscInitialize (pinit.c:924) ==349289== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==349289== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==349289== by 0x16556C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==349289== by 0x15DBC9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==349289== by 0x160D98: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==349289== by 0x160C38: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==349289== by 0x1612CF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==349289== by 0x15BFE5: main (TestCaBasedCellPopulation.cpp:19) ==349289== ==349289== Open file descriptor 8: /dev/shm/open_mpi.0000 ==349289== at 0xEBB4C0C: __open_nocancel (open64_nocancel.c:39) ==349289== by 0xEB38BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==349289== by 0xE4A3822: ??? ==349289== by 0xE4A396F: ??? ==349289== by 0x140CE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==349289== by 0x140CE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==349289== by 0x14084922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==349289== by 0x140292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==349289== by 0x1080E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349289== by 0x107A7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349289== by 0xF49CD38: PetscInitialize (pinit.c:924) ==349289== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==349289== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==349289== by 0x16556C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==349289== by 0x15DBC9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==349289== by 0x160D98: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==349289== by 0x160C38: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==349289== by 0x1612CF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==349289== by 0x15BFE5: main (TestCaBasedCellPopulation.cpp:19) ==349289== ==349289== Open file descriptor 117: ==349289== ==349289== ==349289== Open file descriptor 114: ==349289== ==349289== ==349289== Open file descriptor 111: /etc/ssl/certs/ca-certificates.crt ==349289== ==349289== ==349289== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaBasedCellPopulation_valgrind.txt ==349289== ==349289== ==349289== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==349289== ==349289== ==349289== ==349289== HEAP SUMMARY: ==349289== in use at exit: 995,580 bytes in 13,914 blocks ==349289== total heap usage: 87,971 allocs, 74,057 frees, 1,580,415,325 bytes allocated ==349289== ==349289== LEAK SUMMARY: ==349289== definitely lost: 0 bytes in 0 blocks ==349289== indirectly lost: 0 bytes in 0 blocks ==349289== possibly lost: 0 bytes in 0 blocks ==349289== still reachable: 56 bytes in 3 blocks ==349289== suppressed: 995,524 bytes in 13,911 blocks ==349289== Reachable blocks (those to which a pointer was found) are not shown. ==349289== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==349289== ==349289== For lists of detected and suppressed errors, rerun with: -s ==349289== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)