==349291== Memcheck, a memory error detector ==349291== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==349291== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==349291== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==349291== Parent PID: 347681 ==349291== ==349291== ==349291== FILE DESCRIPTORS: 10 open (3 std) at exit. ==349291== Open file descriptor 12: ==349291== at 0xD2E726D: pipe (pipe.c:29) ==349291== by 0x18A2007D: ??? ==349291== by 0x1402B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==349291== by 0x1080E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349291== by 0x107A7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349291== by 0xF49ED38: PetscInitialize (pinit.c:924) ==349291== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==349291== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==349291== by 0x132B46: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==349291== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==349291== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==349291== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==349291== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==349291== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==349291== ==349291== Open file descriptor 8: /dev/shm/open_mpi.0000 ==349291== at 0xD2EBC0C: __open_nocancel (open64_nocancel.c:39) ==349291== by 0xD26FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==349291== by 0xCBD8822: ??? ==349291== by 0xCBD896F: ??? ==349291== by 0x140D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==349291== by 0x140D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==349291== by 0x14086922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==349291== by 0x1402B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==349291== by 0x1080E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349291== by 0x107A7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349291== by 0xF49ED38: PetscInitialize (pinit.c:924) ==349291== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==349291== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==349291== by 0x132B46: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==349291== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==349291== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==349291== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==349291== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==349291== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==349291== ==349291== Open file descriptor 117: ==349291== ==349291== ==349291== Open file descriptor 114: ==349291== ==349291== ==349291== Open file descriptor 111: /etc/ssl/certs/ca-certificates.crt ==349291== ==349291== ==349291== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==349291== ==349291== ==349291== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==349291== ==349291== ==349291== ==349291== HEAP SUMMARY: ==349291== in use at exit: 995,580 bytes in 13,914 blocks ==349291== total heap usage: 67,875 allocs, 53,961 frees, 1,572,234,718 bytes allocated ==349291== ==349291== LEAK SUMMARY: ==349291== definitely lost: 0 bytes in 0 blocks ==349291== indirectly lost: 0 bytes in 0 blocks ==349291== possibly lost: 0 bytes in 0 blocks ==349291== still reachable: 56 bytes in 3 blocks ==349291== suppressed: 995,524 bytes in 13,911 blocks ==349291== Reachable blocks (those to which a pointer was found) are not shown. ==349291== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==349291== ==349291== For lists of detected and suppressed errors, rerun with: -s ==349291== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)