==366210== Memcheck, a memory error detector ==366210== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==366210== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==366210== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCheckpointing -malloc_debug -malloc_dump -memory_info ==366210== Parent PID: 347681 ==366210== ==366210== ==366210== FILE DESCRIPTORS: 10 open (3 std) at exit. ==366210== Open file descriptor 12: ==366210== at 0xA43626D: pipe (pipe.c:29) ==366210== by 0x13F9607D: ??? ==366210== by 0xF79E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==366210== by 0xBB2E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==366210== by 0xBAC7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==366210== by 0xA7BED38: PetscInitialize (pinit.c:924) ==366210== by 0x9D1B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==366210== by 0x9D1B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==366210== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==366210== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==366210== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==366210== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==366210== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==366210== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==366210== ==366210== Open file descriptor 8: /dev/shm/open_mpi.0000 ==366210== at 0xA43AC0C: __open_nocancel (open64_nocancel.c:39) ==366210== by 0xA3BEBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==366210== by 0x9D4F822: ??? ==366210== by 0x9D4F96F: ??? ==366210== by 0xF8436DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==366210== by 0xF843938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==366210== by 0xF7F9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==366210== by 0xF79E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==366210== by 0xBB2E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==366210== by 0xBAC7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==366210== by 0xA7BED38: PetscInitialize (pinit.c:924) ==366210== by 0x9D1B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==366210== by 0x9D1B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==366210== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==366210== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==366210== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==366210== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==366210== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==366210== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==366210== ==366210== Open file descriptor 117: ==366210== ==366210== ==366210== Open file descriptor 114: ==366210== ==366210== ==366210== Open file descriptor 111: /etc/ssl/certs/ca-certificates.crt ==366210== ==366210== ==366210== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCheckpointing_valgrind.txt ==366210== ==366210== ==366210== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==366210== ==366210== ==366210== ==366210== HEAP SUMMARY: ==366210== in use at exit: 995,988 bytes in 13,919 blocks ==366210== total heap usage: 846,827 allocs, 832,908 frees, 1,676,336,512 bytes allocated ==366210== ==366210== LEAK SUMMARY: ==366210== definitely lost: 0 bytes in 0 blocks ==366210== indirectly lost: 0 bytes in 0 blocks ==366210== possibly lost: 0 bytes in 0 blocks ==366210== still reachable: 24 bytes in 2 blocks ==366210== suppressed: 995,964 bytes in 13,917 blocks ==366210== Reachable blocks (those to which a pointer was found) are not shown. ==366210== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==366210== ==366210== For lists of detected and suppressed errors, rerun with: -s ==366210== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 60 from 34)