==347913== Memcheck, a memory error detector ==347913== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==347913== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==347913== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/io/test/TestColumnDataReaderWriter -malloc_debug -malloc_dump -memory_info ==347913== Parent PID: 347681 ==347913== ==347913== ==347913== FILE DESCRIPTORS: 10 open (3 std) at exit. ==347913== Open file descriptor 12: ==347913== at 0x61DE26D: pipe (pipe.c:29) ==347913== by 0xAF1807D: ??? ==347913== by 0x8A304CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==347913== by 0x5E2D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==347913== by 0x5DC6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==347913== by 0x4A95D38: PetscInitialize (pinit.c:924) ==347913== by 0x496D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==347913== by 0x496D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==347913== by 0x11A4DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==347913== by 0x1156CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==347913== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==347913== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==347913== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==347913== by 0x113AF5: main (TestColumnDataReaderWriter.cpp:19) ==347913== ==347913== Open file descriptor 8: /dev/shm/open_mpi.0000 ==347913== at 0x61E2C0C: __open_nocancel (open64_nocancel.c:39) ==347913== by 0x6166BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==347913== by 0x5D1F822: ??? ==347913== by 0x5D1F96F: ??? ==347913== by 0x8AD76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==347913== by 0x8AD7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==347913== by 0x8A8D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==347913== by 0x8A302DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==347913== by 0x5E2D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==347913== by 0x5DC6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==347913== by 0x4A95D38: PetscInitialize (pinit.c:924) ==347913== by 0x496D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==347913== by 0x496D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==347913== by 0x11A4DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==347913== by 0x1156CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==347913== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==347913== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==347913== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==347913== by 0x113AF5: main (TestColumnDataReaderWriter.cpp:19) ==347913== ==347913== Open file descriptor 117: ==347913== ==347913== ==347913== Open file descriptor 114: ==347913== ==347913== ==347913== Open file descriptor 111: /etc/ssl/certs/ca-certificates.crt ==347913== ==347913== ==347913== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestColumnDataReaderWriter_valgrind.txt ==347913== ==347913== ==347913== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==347913== ==347913== ==347913== ==347913== HEAP SUMMARY: ==347913== in use at exit: 995,084 bytes in 13,913 blocks ==347913== total heap usage: 74,361 allocs, 60,448 frees, 1,574,272,673 bytes allocated ==347913== ==347913== LEAK SUMMARY: ==347913== definitely lost: 0 bytes in 0 blocks ==347913== indirectly lost: 0 bytes in 0 blocks ==347913== possibly lost: 0 bytes in 0 blocks ==347913== still reachable: 24 bytes in 2 blocks ==347913== suppressed: 995,060 bytes in 13,911 blocks ==347913== Reachable blocks (those to which a pointer was found) are not shown. ==347913== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==347913== ==347913== For lists of detected and suppressed errors, rerun with: -s ==347913== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)