==349473== Memcheck, a memory error detector ==349473== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==349473== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==349473== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithBuskeUpdate -malloc_debug -malloc_dump -memory_info ==349473== Parent PID: 347681 ==349473== ==349473== ==349473== FILE DESCRIPTORS: 10 open (3 std) at exit. ==349473== Open file descriptor 12: ==349473== at 0xEBB026D: pipe (pipe.c:29) ==349473== by 0x18A2007D: ??? ==349473== by 0x140294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==349473== by 0x1080E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349473== by 0x107A7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349473== by 0xF49CD38: PetscInitialize (pinit.c:924) ==349473== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==349473== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==349473== by 0x2CC5B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==349473== by 0x2C3A9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==349473== by 0x2C7EB8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==349473== by 0x2C7DB3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==349473== by 0x2C83C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==349473== by 0x2C2295: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==349473== ==349473== Open file descriptor 8: /dev/shm/open_mpi.0000 ==349473== at 0xEBB4C0C: __open_nocancel (open64_nocancel.c:39) ==349473== by 0xEB38BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==349473== by 0xE4A3822: ??? ==349473== by 0xE4A396F: ??? ==349473== by 0x140CE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==349473== by 0x140CE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==349473== by 0x14084922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==349473== by 0x140292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==349473== by 0x1080E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349473== by 0x107A7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349473== by 0xF49CD38: PetscInitialize (pinit.c:924) ==349473== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==349473== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==349473== by 0x2CC5B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==349473== by 0x2C3A9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==349473== by 0x2C7EB8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==349473== by 0x2C7DB3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==349473== by 0x2C83C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==349473== by 0x2C2295: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==349473== ==349473== Open file descriptor 117: ==349473== ==349473== ==349473== Open file descriptor 114: ==349473== ==349473== ==349473== Open file descriptor 111: /etc/ssl/certs/ca-certificates.crt ==349473== ==349473== ==349473== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithBuskeUpdate_valgrind.txt ==349473== ==349473== ==349473== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==349473== ==349473== ==349473== ==349473== HEAP SUMMARY: ==349473== in use at exit: 995,580 bytes in 13,914 blocks ==349473== total heap usage: 69,116 allocs, 55,202 frees, 1,573,242,528 bytes allocated ==349473== ==349473== LEAK SUMMARY: ==349473== definitely lost: 0 bytes in 0 blocks ==349473== indirectly lost: 0 bytes in 0 blocks ==349473== possibly lost: 0 bytes in 0 blocks ==349473== still reachable: 56 bytes in 3 blocks ==349473== suppressed: 995,524 bytes in 13,911 blocks ==349473== Reachable blocks (those to which a pointer was found) are not shown. ==349473== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==349473== ==349473== For lists of detected and suppressed errors, rerun with: -s ==349473== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)