==363374== Memcheck, a memory error detector ==363374== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==363374== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==363374== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==363374== Parent PID: 347681 ==363374== ==363374== ==363374== FILE DESCRIPTORS: 10 open (3 std) at exit. ==363374== Open file descriptor 12: ==363374== at 0x102A126D: pipe (pipe.c:29) ==363374== by 0x1A6E307D: ??? ==363374== by 0x148884CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==363374== by 0xFBA9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==363374== by 0xFB42D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==363374== by 0xE839D38: PetscInitialize (pinit.c:924) ==363374== by 0xE6A9153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==363374== by 0xE6A91A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==363374== by 0x192669: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==363374== by 0x18A60B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==363374== by 0x18DC08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==363374== by 0x18DAA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==363374== by 0x18E13F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==363374== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==363374== ==363374== Open file descriptor 8: /dev/shm/open_mpi.0000 ==363374== at 0x102A5C0C: __open_nocancel (open64_nocancel.c:39) ==363374== by 0x10229BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==363374== by 0xE6DD822: ??? ==363374== by 0xE6DD96F: ??? ==363374== by 0x1492D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==363374== by 0x1492D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==363374== by 0x148E3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==363374== by 0x148882DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==363374== by 0xFBA9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==363374== by 0xFB42D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==363374== by 0xE839D38: PetscInitialize (pinit.c:924) ==363374== by 0xE6A9153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==363374== by 0xE6A91A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==363374== by 0x192669: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==363374== by 0x18A60B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==363374== by 0x18DC08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==363374== by 0x18DAA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==363374== by 0x18E13F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==363374== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==363374== ==363374== Open file descriptor 117: ==363374== ==363374== ==363374== Open file descriptor 114: ==363374== ==363374== ==363374== Open file descriptor 111: /etc/ssl/certs/ca-certificates.crt ==363374== ==363374== ==363374== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==363374== ==363374== ==363374== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==363374== ==363374== ==363374== ==363374== HEAP SUMMARY: ==363374== in use at exit: 995,660 bytes in 13,915 blocks ==363374== total heap usage: 874,133 allocs, 860,218 frees, 1,693,943,975 bytes allocated ==363374== ==363374== LEAK SUMMARY: ==363374== definitely lost: 0 bytes in 0 blocks ==363374== indirectly lost: 0 bytes in 0 blocks ==363374== possibly lost: 0 bytes in 0 blocks ==363374== still reachable: 120 bytes in 4 blocks ==363374== suppressed: 995,540 bytes in 13,911 blocks ==363374== Reachable blocks (those to which a pointer was found) are not shown. ==363374== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==363374== ==363374== For lists of detected and suppressed errors, rerun with: -s ==363374== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)