==349822== Memcheck, a memory error detector ==349822== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==349822== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==349822== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==349822== Parent PID: 347681 ==349822== ==349822== ==349822== FILE DESCRIPTORS: 10 open (3 std) at exit. ==349822== Open file descriptor 12: ==349822== at 0xF03626D: pipe (pipe.c:29) ==349822== by 0x18A2007D: ??? ==349822== by 0x140294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==349822== by 0x108F5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349822== by 0x1088ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349822== by 0xF585D38: PetscInitialize (pinit.c:924) ==349822== by 0xE80C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==349822== by 0xE80C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==349822== by 0x226536: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==349822== by 0x21FB71: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==349822== by 0x2236DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==349822== by 0x22357C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==349822== by 0x223C13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==349822== by 0x21DF55: main (TestOffLatticeSimulationWithPdes.cpp:19) ==349822== ==349822== Open file descriptor 8: /dev/shm/open_mpi.0000 ==349822== at 0xF03AC0C: __open_nocancel (open64_nocancel.c:39) ==349822== by 0xEFBEBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==349822== by 0xE840822: ??? ==349822== by 0xE84096F: ??? ==349822== by 0x140CE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==349822== by 0x140CE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==349822== by 0x14084922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==349822== by 0x140292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==349822== by 0x108F5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349822== by 0x1088ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349822== by 0xF585D38: PetscInitialize (pinit.c:924) ==349822== by 0xE80C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==349822== by 0xE80C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==349822== by 0x226536: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==349822== by 0x21FB71: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==349822== by 0x2236DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==349822== by 0x22357C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==349822== by 0x223C13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==349822== by 0x21DF55: main (TestOffLatticeSimulationWithPdes.cpp:19) ==349822== ==349822== Open file descriptor 117: ==349822== ==349822== ==349822== Open file descriptor 114: ==349822== ==349822== ==349822== Open file descriptor 111: /etc/ssl/certs/ca-certificates.crt ==349822== ==349822== ==349822== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==349822== ==349822== ==349822== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==349822== ==349822== ==349822== ==349822== HEAP SUMMARY: ==349822== in use at exit: 995,524 bytes in 13,910 blocks ==349822== total heap usage: 7,498,815 allocs, 7,484,905 frees, 2,875,991,224 bytes allocated ==349822== ==349822== LEAK SUMMARY: ==349822== definitely lost: 0 bytes in 0 blocks ==349822== indirectly lost: 0 bytes in 0 blocks ==349822== possibly lost: 0 bytes in 0 blocks ==349822== still reachable: 56 bytes in 3 blocks ==349822== suppressed: 995,468 bytes in 13,907 blocks ==349822== Reachable blocks (those to which a pointer was found) are not shown. ==349822== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==349822== ==349822== For lists of detected and suppressed errors, rerun with: -s ==349822== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)