==349911== Memcheck, a memory error detector ==349911== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==349911== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==349911== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==349911== Parent PID: 347681 ==349911== ==349911== ==349911== FILE DESCRIPTORS: 10 open (3 std) at exit. ==349911== Open file descriptor 12: ==349911== at 0x1014E26D: pipe (pipe.c:29) ==349911== by 0x18A2007D: ??? ==349911== by 0x13F8B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==349911== by 0xF96F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349911== by 0xF908D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349911== by 0xE5FFD38: PetscInitialize (pinit.c:924) ==349911== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==349911== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==349911== by 0x1FFF0F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==349911== by 0x1F9AB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==349911== by 0x1FD424: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==349911== by 0x1FD2C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==349911== by 0x1FD95B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==349911== by 0x1F7ED5: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==349911== ==349911== Open file descriptor 8: /dev/shm/open_mpi.0000 ==349911== at 0x10152C0C: __open_nocancel (open64_nocancel.c:39) ==349911== by 0x100D6BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==349911== by 0xE4A3822: ??? ==349911== by 0xE4A396F: ??? ==349911== by 0x140306DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==349911== by 0x14030938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==349911== by 0x13FE6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==349911== by 0x13F8B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==349911== by 0xF96F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349911== by 0xF908D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349911== by 0xE5FFD38: PetscInitialize (pinit.c:924) ==349911== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==349911== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==349911== by 0x1FFF0F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==349911== by 0x1F9AB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==349911== by 0x1FD424: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==349911== by 0x1FD2C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==349911== by 0x1FD95B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==349911== by 0x1F7ED5: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==349911== ==349911== Open file descriptor 117: ==349911== ==349911== ==349911== Open file descriptor 114: ==349911== ==349911== ==349911== Open file descriptor 111: /etc/ssl/certs/ca-certificates.crt ==349911== ==349911== ==349911== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==349911== ==349911== ==349911== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==349911== ==349911== ==349911== ==349911== HEAP SUMMARY: ==349911== in use at exit: 995,524 bytes in 13,910 blocks ==349911== total heap usage: 9,709,881 allocs, 9,695,971 frees, 2,822,522,597 bytes allocated ==349911== ==349911== LEAK SUMMARY: ==349911== definitely lost: 0 bytes in 0 blocks ==349911== indirectly lost: 0 bytes in 0 blocks ==349911== possibly lost: 0 bytes in 0 blocks ==349911== still reachable: 56 bytes in 3 blocks ==349911== suppressed: 995,468 bytes in 13,907 blocks ==349911== Reachable blocks (those to which a pointer was found) are not shown. ==349911== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==349911== ==349911== For lists of detected and suppressed errors, rerun with: -s ==349911== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)