==350055== Memcheck, a memory error detector ==350055== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==350055== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==350055== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==350055== Parent PID: 347681 ==350055== ==350055== ==350055== FILE DESCRIPTORS: 10 open (3 std) at exit. ==350055== Open file descriptor 12: ==350055== at 0xF11526D: pipe (pipe.c:29) ==350055== by 0x18A2107D: ??? ==350055== by 0x1414C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==350055== by 0x10D71418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==350055== by 0x10D0AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==350055== by 0xFA01D38: PetscInitialize (pinit.c:924) ==350055== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==350055== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==350055== by 0x1D3486: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==350055== by 0x1CCDB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==350055== by 0x1D0554: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==350055== by 0x1D03F4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==350055== by 0x1D0A8B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==350055== by 0x1CB1D5: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==350055== ==350055== Open file descriptor 8: /dev/shm/open_mpi.0000 ==350055== at 0xF119C0C: __open_nocancel (open64_nocancel.c:39) ==350055== by 0xF09DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==350055== by 0xE4A3822: ??? ==350055== by 0xE4A396F: ??? ==350055== by 0x141F16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==350055== by 0x141F1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==350055== by 0x141A7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==350055== by 0x1414C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==350055== by 0x10D71418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==350055== by 0x10D0AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==350055== by 0xFA01D38: PetscInitialize (pinit.c:924) ==350055== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==350055== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==350055== by 0x1D3486: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==350055== by 0x1CCDB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==350055== by 0x1D0554: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==350055== by 0x1D03F4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==350055== by 0x1D0A8B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==350055== by 0x1CB1D5: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==350055== ==350055== Open file descriptor 117: ==350055== ==350055== ==350055== Open file descriptor 114: ==350055== ==350055== ==350055== Open file descriptor 111: /etc/ssl/certs/ca-certificates.crt ==350055== ==350055== ==350055== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==350055== ==350055== ==350055== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==350055== ==350055== ==350055== ==350055== HEAP SUMMARY: ==350055== in use at exit: 995,524 bytes in 13,910 blocks ==350055== total heap usage: 7,108,532 allocs, 7,094,622 frees, 8,315,232,273 bytes allocated ==350055== ==350055== LEAK SUMMARY: ==350055== definitely lost: 0 bytes in 0 blocks ==350055== indirectly lost: 0 bytes in 0 blocks ==350055== possibly lost: 0 bytes in 0 blocks ==350055== still reachable: 56 bytes in 3 blocks ==350055== suppressed: 995,468 bytes in 13,907 blocks ==350055== Reachable blocks (those to which a pointer was found) are not shown. ==350055== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==350055== ==350055== For lists of detected and suppressed errors, rerun with: -s ==350055== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)