==353345== Memcheck, a memory error detector ==353345== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==353345== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==353345== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==353345== Parent PID: 347681 ==353345== ==353345== ==353345== FILE DESCRIPTORS: 10 open (3 std) at exit. ==353345== Open file descriptor 12: ==353345== at 0xEFF426D: pipe (pipe.c:29) ==353345== by 0x18A2007D: ??? ==353345== by 0x140294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==353345== by 0x108F5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==353345== by 0x1088ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==353345== by 0xF585D38: PetscInitialize (pinit.c:924) ==353345== by 0xE80C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==353345== by 0xE80C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==353345== by 0x135832: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==353345== by 0x1303C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==353345== by 0x133048: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==353345== by 0x132EE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==353345== by 0x13357F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==353345== by 0x12E7B5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==353345== ==353345== Open file descriptor 8: /dev/shm/open_mpi.0000 ==353345== at 0xEFF8C0C: __open_nocancel (open64_nocancel.c:39) ==353345== by 0xEF7CBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==353345== by 0xE840822: ??? ==353345== by 0xE84096F: ??? ==353345== by 0x140CE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==353345== by 0x140CE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==353345== by 0x14084922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==353345== by 0x140292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==353345== by 0x108F5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==353345== by 0x1088ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==353345== by 0xF585D38: PetscInitialize (pinit.c:924) ==353345== by 0xE80C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==353345== by 0xE80C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==353345== by 0x135832: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==353345== by 0x1303C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==353345== by 0x133048: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==353345== by 0x132EE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==353345== by 0x13357F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==353345== by 0x12E7B5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==353345== ==353345== Open file descriptor 117: ==353345== ==353345== ==353345== Open file descriptor 114: ==353345== ==353345== ==353345== Open file descriptor 111: /etc/ssl/certs/ca-certificates.crt ==353345== ==353345== ==353345== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==353345== ==353345== ==353345== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==353345== ==353345== ==353345== ==353345== HEAP SUMMARY: ==353345== in use at exit: 995,524 bytes in 13,910 blocks ==353345== total heap usage: 2,368,939 allocs, 2,355,029 frees, 2,009,379,831 bytes allocated ==353345== ==353345== LEAK SUMMARY: ==353345== definitely lost: 0 bytes in 0 blocks ==353345== indirectly lost: 0 bytes in 0 blocks ==353345== possibly lost: 0 bytes in 0 blocks ==353345== still reachable: 56 bytes in 3 blocks ==353345== suppressed: 995,468 bytes in 13,907 blocks ==353345== Reachable blocks (those to which a pointer was found) are not shown. ==353345== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==353345== ==353345== For lists of detected and suppressed errors, rerun with: -s ==353345== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)