==354540== Memcheck, a memory error detector ==354540== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==354540== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==354540== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==354540== Parent PID: 347681 ==354540== ==354540== ==354540== FILE DESCRIPTORS: 10 open (3 std) at exit. ==354540== Open file descriptor 12: ==354540== at 0xEC9926D: pipe (pipe.c:29) ==354540== by 0x18A2007D: ??? ==354540== by 0x140294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==354540== by 0x108F5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==354540== by 0x1088ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==354540== by 0xF585D38: PetscInitialize (pinit.c:924) ==354540== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==354540== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==354540== by 0x1D7654: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==354540== by 0x1CF139: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==354540== by 0x1D29B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==354540== by 0x1D2858: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==354540== by 0x1D2EEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==354540== by 0x1CD555: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==354540== ==354540== Open file descriptor 8: /dev/shm/open_mpi.0000 ==354540== at 0xEC9DC0C: __open_nocancel (open64_nocancel.c:39) ==354540== by 0xEC21BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==354540== by 0xE4A3822: ??? ==354540== by 0xE4A396F: ??? ==354540== by 0x140CE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==354540== by 0x140CE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==354540== by 0x14084922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==354540== by 0x140292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==354540== by 0x108F5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==354540== by 0x1088ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==354540== by 0xF585D38: PetscInitialize (pinit.c:924) ==354540== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==354540== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==354540== by 0x1D7654: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==354540== by 0x1CF139: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==354540== by 0x1D29B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==354540== by 0x1D2858: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==354540== by 0x1D2EEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==354540== by 0x1CD555: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==354540== ==354540== Open file descriptor 117: ==354540== ==354540== ==354540== Open file descriptor 114: ==354540== ==354540== ==354540== Open file descriptor 111: /etc/ssl/certs/ca-certificates.crt ==354540== ==354540== ==354540== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==354540== ==354540== ==354540== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==354540== ==354540== ==354540== ==354540== HEAP SUMMARY: ==354540== in use at exit: 995,540 bytes in 13,911 blocks ==354540== total heap usage: 11,694,273 allocs, 11,680,362 frees, 2,441,574,407 bytes allocated ==354540== ==354540== LEAK SUMMARY: ==354540== definitely lost: 0 bytes in 0 blocks ==354540== indirectly lost: 0 bytes in 0 blocks ==354540== possibly lost: 0 bytes in 0 blocks ==354540== still reachable: 72 bytes in 4 blocks ==354540== suppressed: 995,468 bytes in 13,907 blocks ==354540== Reachable blocks (those to which a pointer was found) are not shown. ==354540== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==354540== ==354540== For lists of detected and suppressed errors, rerun with: -s ==354540== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)