==349495== Memcheck, a memory error detector ==349495== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==349495== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==349495== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPeriodicNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==349495== Parent PID: 347681 ==349495== ==349495== ==349495== FILE DESCRIPTORS: 10 open (3 std) at exit. ==349495== Open file descriptor 12: ==349495== at 0xEC5526D: pipe (pipe.c:29) ==349495== by 0x18A2007D: ??? ==349495== by 0x140294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==349495== by 0x108F5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349495== by 0x1088ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349495== by 0xF585D38: PetscInitialize (pinit.c:924) ==349495== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==349495== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==349495== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==349495== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==349495== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==349495== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==349495== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==349495== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==349495== ==349495== Open file descriptor 8: /dev/shm/open_mpi.0000 ==349495== at 0xEC59C0C: __open_nocancel (open64_nocancel.c:39) ==349495== by 0xEBDDBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==349495== by 0xE4A3822: ??? ==349495== by 0xE4A396F: ??? ==349495== by 0x140CE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==349495== by 0x140CE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==349495== by 0x14084922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==349495== by 0x140292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==349495== by 0x108F5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349495== by 0x1088ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==349495== by 0xF585D38: PetscInitialize (pinit.c:924) ==349495== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==349495== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==349495== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==349495== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==349495== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==349495== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==349495== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==349495== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==349495== ==349495== Open file descriptor 117: ==349495== ==349495== ==349495== Open file descriptor 114: ==349495== ==349495== ==349495== Open file descriptor 111: /etc/ssl/certs/ca-certificates.crt ==349495== ==349495== ==349495== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPeriodicNodeBasedCellPopulationParallelMethods_valgrind.txt ==349495== ==349495== ==349495== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==349495== ==349495== ==349495== ==349495== HEAP SUMMARY: ==349495== in use at exit: 995,580 bytes in 13,914 blocks ==349495== total heap usage: 65,196 allocs, 51,282 frees, 1,571,932,115 bytes allocated ==349495== ==349495== LEAK SUMMARY: ==349495== definitely lost: 0 bytes in 0 blocks ==349495== indirectly lost: 0 bytes in 0 blocks ==349495== possibly lost: 0 bytes in 0 blocks ==349495== still reachable: 56 bytes in 3 blocks ==349495== suppressed: 995,524 bytes in 13,911 blocks ==349495== Reachable blocks (those to which a pointer was found) are not shown. ==349495== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==349495== ==349495== For lists of detected and suppressed errors, rerun with: -s ==349495== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)