==363064== Memcheck, a memory error detector ==363064== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==363064== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==363064== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningDeltaNotchSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==363064== Parent PID: 347681 ==363064== ==363064== ==363064== FILE DESCRIPTORS: 10 open (3 std) at exit. ==363064== Open file descriptor 12: ==363064== at 0xEB6E26D: pipe (pipe.c:29) ==363064== by 0x18A2007D: ??? ==363064== by 0x140294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==363064== by 0x1080E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==363064== by 0x107A7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==363064== by 0xF49ED38: PetscInitialize (pinit.c:924) ==363064== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==363064== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==363064== by 0x122D30: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==363064== by 0x11E513: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==363064== by 0x120830: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==363064== by 0x12072B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==363064== by 0x120D3F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==363064== by 0x11CD15: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==363064== ==363064== Open file descriptor 8: /dev/shm/open_mpi.0000 ==363064== at 0xEB72C0C: __open_nocancel (open64_nocancel.c:39) ==363064== by 0xEAF6BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==363064== by 0xE4A3822: ??? ==363064== by 0xE4A396F: ??? ==363064== by 0x140CE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==363064== by 0x140CE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==363064== by 0x14084922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==363064== by 0x140292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==363064== by 0x1080E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==363064== by 0x107A7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==363064== by 0xF49ED38: PetscInitialize (pinit.c:924) ==363064== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==363064== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==363064== by 0x122D30: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==363064== by 0x11E513: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==363064== by 0x120830: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==363064== by 0x12072B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==363064== by 0x120D3F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==363064== by 0x11CD15: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==363064== ==363064== Open file descriptor 117: ==363064== ==363064== ==363064== Open file descriptor 114: ==363064== ==363064== ==363064== Open file descriptor 111: /etc/ssl/certs/ca-certificates.crt ==363064== ==363064== ==363064== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningDeltaNotchSimulationsTutorial_valgrind.txt ==363064== ==363064== ==363064== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==363064== ==363064== ==363064== ==363064== HEAP SUMMARY: ==363064== in use at exit: 995,524 bytes in 13,910 blocks ==363064== total heap usage: 5,189,100 allocs, 5,175,190 frees, 2,011,333,637 bytes allocated ==363064== ==363064== LEAK SUMMARY: ==363064== definitely lost: 0 bytes in 0 blocks ==363064== indirectly lost: 0 bytes in 0 blocks ==363064== possibly lost: 0 bytes in 0 blocks ==363064== still reachable: 56 bytes in 3 blocks ==363064== suppressed: 995,468 bytes in 13,907 blocks ==363064== Reachable blocks (those to which a pointer was found) are not shown. ==363064== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==363064== ==363064== For lists of detected and suppressed errors, rerun with: -s ==363064== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)