==363262== Memcheck, a memory error detector ==363262== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==363262== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==363262== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==363262== Parent PID: 347681 ==363262== ==363262== ==363262== FILE DESCRIPTORS: 10 open (3 std) at exit. ==363262== Open file descriptor 12: ==363262== at 0xD2A526D: pipe (pipe.c:29) ==363262== by 0x18A2007D: ??? ==363262== by 0x1402B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==363262== by 0x1080E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==363262== by 0x107A7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==363262== by 0xF49ED38: PetscInitialize (pinit.c:924) ==363262== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==363262== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==363262== by 0x124714: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==363262== by 0x11FC2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==363262== by 0x12224E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==363262== by 0x1220EE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==363262== by 0x122785: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==363262== by 0x11E055: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==363262== ==363262== Open file descriptor 8: /dev/shm/open_mpi.0000 ==363262== at 0xD2A9C0C: __open_nocancel (open64_nocancel.c:39) ==363262== by 0xD22DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==363262== by 0xCBD8822: ??? ==363262== by 0xCBD896F: ??? ==363262== by 0x140D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==363262== by 0x140D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==363262== by 0x14086922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==363262== by 0x1402B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==363262== by 0x1080E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==363262== by 0x107A7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==363262== by 0xF49ED38: PetscInitialize (pinit.c:924) ==363262== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==363262== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==363262== by 0x124714: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==363262== by 0x11FC2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==363262== by 0x12224E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==363262== by 0x1220EE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==363262== by 0x122785: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==363262== by 0x11E055: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==363262== ==363262== Open file descriptor 117: ==363262== ==363262== ==363262== Open file descriptor 114: ==363262== ==363262== ==363262== Open file descriptor 111: /etc/ssl/certs/ca-certificates.crt ==363262== ==363262== ==363262== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==363262== ==363262== ==363262== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==363262== ==363262== ==363262== ==363262== HEAP SUMMARY: ==363262== in use at exit: 995,524 bytes in 13,910 blocks ==363262== total heap usage: 40,699,012 allocs, 40,685,102 frees, 4,063,521,477 bytes allocated ==363262== ==363262== LEAK SUMMARY: ==363262== definitely lost: 0 bytes in 0 blocks ==363262== indirectly lost: 0 bytes in 0 blocks ==363262== possibly lost: 0 bytes in 0 blocks ==363262== still reachable: 56 bytes in 3 blocks ==363262== suppressed: 995,468 bytes in 13,907 blocks ==363262== Reachable blocks (those to which a pointer was found) are not shown. ==363262== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==363262== ==363262== For lists of detected and suppressed errors, rerun with: -s ==363262== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)