==781400== Memcheck, a memory error detector ==781400== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==781400== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==781400== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial -malloc_debug -malloc_dump -memory_info ==781400== Parent PID: 773799 ==781400== ==781400== ==781400== FILE DESCRIPTORS: 9 open (3 std) at exit. ==781400== Open file descriptor 12: ==781400== at 0xFD1B26D: pipe (pipe.c:29) ==781400== by 0x18AE107D: ??? ==781400== by 0x1402F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==781400== by 0xF968418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==781400== by 0xF901D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==781400== by 0xE5F8D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==781400== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==781400== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==781400== by 0x131579: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==781400== by 0x12C94F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==781400== by 0x12EE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==781400== by 0x12ED37: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==781400== by 0x12F34B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==781400== by 0x12B145: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==781400== ==781400== Open file descriptor 8: /dev/shm/open_mpi.0000 ==781400== at 0xFD1FC0C: __open_nocancel (open64_nocancel.c:39) ==781400== by 0xFCA3BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==781400== by 0xE49F822: ??? ==781400== by 0xE49F96F: ??? ==781400== by 0x140D46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==781400== by 0x140D4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==781400== by 0x1408A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==781400== by 0x1402F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==781400== by 0xF968418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==781400== by 0xF901D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==781400== by 0xE5F8D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==781400== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==781400== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==781400== by 0x131579: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==781400== by 0x12C94F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==781400== by 0x12EE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==781400== by 0x12ED37: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==781400== by 0x12F34B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==781400== by 0x12B145: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==781400== ==781400== Open file descriptor 115: ==781400== ==781400== ==781400== Open file descriptor 112: ==781400== ==781400== ==781400== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial_valgrind.txt ==781400== ==781400== ==781400== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==781400== ==781400== ==781400== ==781400== HEAP SUMMARY: ==781400== in use at exit: 858,019 bytes in 12,113 blocks ==781400== total heap usage: 500,111 allocs, 487,998 frees, 1,854,124,073 bytes allocated ==781400== ==781400== LEAK SUMMARY: ==781400== definitely lost: 0 bytes in 0 blocks ==781400== indirectly lost: 0 bytes in 0 blocks ==781400== possibly lost: 0 bytes in 0 blocks ==781400== still reachable: 56 bytes in 3 blocks ==781400== suppressed: 857,963 bytes in 12,110 blocks ==781400== Reachable blocks (those to which a pointer was found) are not shown. ==781400== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==781400== ==781400== For lists of detected and suppressed errors, rerun with: -s ==781400== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)