==775432== Memcheck, a memory error detector ==775432== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==775432== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==775432== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithBuskeUpdate -malloc_debug -malloc_dump -memory_info ==775432== Parent PID: 773799 ==775432== ==775432== ==775432== FILE DESCRIPTORS: 9 open (3 std) at exit. ==775432== Open file descriptor 12: ==775432== at 0xE86426D: pipe (pipe.c:29) ==775432== by 0x18AE307D: ??? ==775432== by 0x140804CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==775432== by 0x104C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==775432== by 0x1045AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==775432== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==775432== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==775432== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==775432== by 0x2CC514: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==775432== by 0x2C3A5F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==775432== by 0x2C7E14: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==775432== by 0x2C7D0F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==775432== by 0x2C8323: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==775432== by 0x2C2255: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==775432== ==775432== Open file descriptor 8: /dev/shm/open_mpi.0000 ==775432== at 0xE868C0C: __open_nocancel (open64_nocancel.c:39) ==775432== by 0xE7ECBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==775432== by 0xE49F822: ??? ==775432== by 0xE49F96F: ??? ==775432== by 0x141256DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==775432== by 0x14125938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==775432== by 0x140DB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==775432== by 0x140802DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==775432== by 0x104C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==775432== by 0x1045AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==775432== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==775432== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==775432== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==775432== by 0x2CC514: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==775432== by 0x2C3A5F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==775432== by 0x2C7E14: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==775432== by 0x2C7D0F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==775432== by 0x2C8323: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==775432== by 0x2C2255: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==775432== ==775432== Open file descriptor 115: ==775432== ==775432== ==775432== Open file descriptor 112: ==775432== ==775432== ==775432== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithBuskeUpdate_valgrind.txt ==775432== ==775432== ==775432== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==775432== ==775432== ==775432== ==775432== HEAP SUMMARY: ==775432== in use at exit: 858,019 bytes in 12,113 blocks ==775432== total heap usage: 65,086 allocs, 52,973 frees, 1,544,622,661 bytes allocated ==775432== ==775432== LEAK SUMMARY: ==775432== definitely lost: 0 bytes in 0 blocks ==775432== indirectly lost: 0 bytes in 0 blocks ==775432== possibly lost: 0 bytes in 0 blocks ==775432== still reachable: 56 bytes in 3 blocks ==775432== suppressed: 857,963 bytes in 12,110 blocks ==775432== Reachable blocks (those to which a pointer was found) are not shown. ==775432== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==775432== ==775432== For lists of detected and suppressed errors, rerun with: -s ==775432== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 24 from 24)